ZBED5-AS1

 

Full name: ZBED5 antisense RNA 1 Alias Symbol: 
Type: non-coding RNA Cytoband: 11p15.4
Entrez ID: 729013 HGNC ID: HGNC:48646 Ensembl Gene: ENSG00000247271 OMIM ID: 

 

Expression of ZBED5-AS1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZBED5-AS1 729013 235010_at -0.0981 0.8648
GSE26886 ZBED5-AS1 729013 235010_at 0.2195 0.3535
GSE45670 ZBED5-AS1 729013 235010_at -0.0395 0.8773
GSE53622 ZBED5-AS1 729013 54665 0.1400 0.1694
GSE53624 ZBED5-AS1 729013 14008 0.0316 0.6869
GSE63941 ZBED5-AS1 729013 235010_at 0.2622 0.8089
GSE77861 ZBED5-AS1 729013 235010_at 0.1185 0.8782
SRP007169 ZBED5-AS1 729013 RNAseq -0.4132 0.4638
SRP008496 ZBED5-AS1 729013 RNAseq 0.1832 0.6676
SRP064894 ZBED5-AS1 729013 RNAseq 0.0135 0.9577
SRP133303 ZBED5-AS1 729013 RNAseq 0.1539 0.5826
SRP159526 ZBED5-AS1 729013 RNAseq 0.1051 0.7055
SRP193095 ZBED5-AS1 729013 RNAseq -0.0105 0.9407
SRP219564 ZBED5-AS1 729013 RNAseq -0.4786 0.2919

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by ZBED5-AS1 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of ZBED5-AS1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZBED5-AS1 729013 0 9 21
GSE20123 ZBED5-AS1 729013 0 9 21
GSE43470 ZBED5-AS1 729013 1 6 36
GSE46452 ZBED5-AS1 729013 7 5 47
GSE47630 ZBED5-AS1 729013 3 11 26
GSE54993 ZBED5-AS1 729013 3 1 66
GSE54994 ZBED5-AS1 729013 4 12 37
GSE60625 ZBED5-AS1 729013 0 0 11
GSE74703 ZBED5-AS1 729013 1 4 31
GSE74704 ZBED5-AS1 729013 0 7 13

Total number of gains: 19; Total number of losses: 64; Total Number of normals: 309.  

 

Somatic mutations of ZBED5-AS1:

 

Generating mutation plots.

 

Highly correlated genes for ZBED5-AS1:

 

Showing all 3 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZBED5-AS1DERA0.67173303
ZBED5-AS1TMEM41B0.578964303
ZBED5-AS1PTPMT10.536898403

For details and further investigation, click here