Chr Gene Start End Control Avg Tumor Avg Delta Beta Fold P Value 1 CAPZB 19763994 19765307 0.265391141176 0.753293514252 0.487902343273 2.838427 0.00000067 1 HLX 221057478 221057653 0.444649606943 0.862260758877 0.417611151934 1.939192 0.00000000 1 HLX 221068565 221068895 0.390515446663 0.789840102196 0.399324655533 2.022558 0.00000202 1 ELTD1 79472202 79472459 0.286730200052 0.672350347042 0.385620146990 2.344888 0.00000021 1 DNM3 172113020 172114905 0.428421556950 0.813848972321 0.385427415371 1.899645 0.00000027 1 MIR5087 147782393 147782723 0.172339692712 0.550900340080 0.378560662270 3.196596 0.00000131 1 HLX 221055639 221055799 0.411805301905 0.785875797272 0.374070495367 1.908367 0.00000001 1 ESPN 6515500 6515704 0.219912052155 0.589922428131 0.370010375977 2.682538 0.00001140 1 LOC728989 146543961 146544127 0.342965662479 0.701646029949 0.358680337667 2.045820 0.00000448 1 CAPN2 223936719 223936918 0.207822367549 0.561854541302 0.354032158852 2.703532 0.00004236 1 B3GALT2 193154952 193155646 0.502884209156 0.856519639492 0.353635430336 1.703214 0.00021707 1 C2CD4D 151810807 151810984 0.193651944399 0.546453773975 0.352801829576 2.821835 0.00010087 1 TP73 3600249 3601365 0.156732290983 0.501056849957 0.344324558973 3.196896 0.00001124 1 BARHL2 91184863 91185316 0.234690442681 0.577861487865 0.343171060085 2.462229 0.00001677 1 HLX 221054124 221054422 0.306611955166 0.644839048386 0.338227063417 2.103111 0.00006424 1 GALNT2 230271820 230273142 0.542916119099 0.876271247864 0.333355128765 1.614008 0.00000000 1 ZBTB40 22611976 22612306 0.453421264887 0.781020462513 0.327599167824 1.722505 0.00000017 1 RUNX3 25240379 25241424 0.356931805611 0.683472037315 0.326540261507 1.914853 0.00000581 1 GSTM5 110254802 110255001 0.358015209436 0.672461450100 0.314446210861 1.878304 0.00000377 1 BCAN 156616699 156616935 0.316661506891 0.628348469734 0.311686933041 1.984291 0.00027113 1 ATAD3C 1397747 1398045 0.283401757479 0.591289937496 0.307888209820 2.086402 0.00001124 1 KCNAB2 6093949 6094461 0.393595457077 0.698515951633 0.304920494556 1.774705 0.00000179 1 RUNX3 25257537 25257813 0.234836012125 0.536344885826 0.301508873701 2.283912 0.00000000 1 LINC00210 218097482 218099533 0.259558767080 0.560629725456 0.301070988178 2.159934 0.00000179 1 GNG4 235814310 235814368 0.246026128531 0.542598903179 0.296572744846 2.205452 0.00000468 1 RSG1 16553102 16553432 0.270150125027 0.562578260899 0.292428165674 2.082465 0.00000689 1 LOC388692 149169033 149171292 0.228844895959 0.519808828831 0.290963947773 2.271446 0.00000347 1 RPL22 6260282 6260437 0.484275609255 0.768638014793 0.284362435341 1.587191 0.00000060 1 BARHL2 91190086 91190531 0.178137794137 0.461494088173 0.283356279135 2.590658 0.00000307 1 SPSB1 9400436 9401031 0.553761363029 0.836400866508 0.282639503479 1.510399 0.00033785 1 LOC388692 149155610 149156014 0.198257282376 0.480676472187 0.282419204712 2.424509 0.00002859 1 PTPRF 44085715 44089801 0.456640422344 0.738946735859 0.282306283712 1.618224 0.00001256 1 RUNX3 25253939 25254298 0.536074340343 0.817922472954 0.281848132610 1.525763 0.00001620 1 WARS2 119535899 119536229 0.146992340684 0.427180498838 0.280188143253 2.906141 0.00000231 1 COL9A2 40769589 40769824 0.564788460732 0.844858467579 0.280069977045 1.495885 0.00000219 1 NR5A2 199716289 199718404 0.523133099079 0.802216589451 0.279083520174 1.533485 0.00000098 1 DDR2 162602277 162602789 0.176352679729 0.453774660826 0.277421981096 2.573109 0.00001763 1 PRKCZ 2106924 2108155 0.596515357494 0.873476624489 0.276961296797 1.464299 0.00008105 1 KIAA1522 33230584 33231868 0.560882747173 0.837652444839 0.276769697666 1.493454 0.00000000 1 TAL1 47692262 47695484 0.347148269415 0.622159779072 0.275011539459 1.792202 0.00000007 1 LHX8 75602766 75603074 0.120762579143 0.395516604185 0.274754047394 3.275159 0.00000503 1 KIAA1026 15255568 15256708 0.334263056517 0.607556879520 0.273293823004 1.817601 0.00104296 1 No Gene 244094786 244095018 0.291005104780 0.552908122540 0.261903047562 1.899995 0.00001888 1 CACYBP 174968025 174968208 0.332284837961 0.585793554783 0.253508716822 1.762926 0.00015938 1 COL11A1 103573733 103574730 0.148843228817 0.400756448507 0.251913219690 2.692473 0.00000800 1 DMBX1 46957614 46961084 0.235904604197 0.487441986799 0.251537412405 2.066267 0.00000257 1 FOXD3 63792018 63792404 0.291327267885 0.535632252693 0.244304955006 1.838593 0.00522484 1 PAX7 19051718 19052690 0.325425654650 0.565030217171 0.239604577422 1.736281 0.00051141 1 NDUFS2 161167963 161171185 0.431643664837 0.659464776516 0.227821126580 1.527799 0.00194629 1 KCNAB2 6105373 6106844 0.678808033466 0.906075596809 0.227267578244 1.334804 0.00000000 1 SCNM1 151137163 151137487 0.320896118879 0.547896921635 0.227000802755 1.707397 0.00028751 1 LYPLA2 24120260 24124262 0.450696349144 0.676121234894 0.225424870849 1.500170 0.00021077 1 FLJ42875 2984138 2984355 0.200448557734 0.425826966763 0.225378409028 2.124370 0.00000225 1 ELAVL4 50513645 50513663 0.069000616670 0.293691098690 0.224690467119 4.256354 0.00002914 1 SSBP3 54723191 54723489 0.717276632786 0.941595792770 0.224319115281 1.312737 0.00000492 1 LOC728448 40024485 40025718 0.551271021366 0.772109210491 0.220838174224 1.400598 0.00000086 1 MORN1 2261353 2263353 0.371897339821 0.591318607330 0.219421267509 1.590005 0.04795354 1 WNT2B 113051845 113052005 0.250113993883 0.466534614563 0.216420635581 1.865288 0.00039732 1 C1orf61 156357674 156358070 0.264627128839 0.478485286236 0.213858172297 1.808149 0.00030747 1 MIR4666A 228657462 228657792 0.181463479996 0.391080230474 0.209616765380 2.155146 0.00000127 1 LOC100129924 43250526 43250856 0.183481767774 0.385116279125 0.201634496450 2.098935 0.00008649 1 CCDC17 46089575 46089811 0.586102545261 0.777943611145 0.191841050982 1.327317 0.00000656 1 BARHL2 91193424 91197239 0.183828145266 0.367137312889 0.183309167624 1.997177 0.00050113 1 LOC388692 149193025 149195450 0.203193619847 0.382956802845 0.179763182998 1.884689 0.00000278 1 CTSK 150780302 150784304 0.659185111523 0.838867962360 0.179682895541 1.272583 0.00065455 1 SHC1 154941630 154945287 0.257281184196 0.434949129820 0.177667945623 1.690559 0.00001691 1 WARS2 119541994 119543378 0.170735254884 0.345532625914 0.174797385931 2.023792 0.00006543 1 C1orf61 156389984 156390369 0.149865806103 0.324465155602 0.174599349499 2.165038 0.00002661 1 PVRL4 161049499 161049735 0.652867853642 0.827026546001 0.174158692360 1.266759 0.00008107 1 ACOT11 55088618 55089858 0.619295001030 0.792103052139 0.172808095813 1.279040 0.00017205 1 VWA1 1376837 1378757 0.550810515881 0.723603725433 0.172793239355 1.313707 0.01130922 1 FAF1 50894450 50897986 0.085449859500 0.250591635704 0.165141776204 2.932616 0.00001256 1 KIAA1026 15271466 15272594 0.212650537491 0.371938109398 0.159287571907 1.749058 0.00000836 1 MIR429 1103520 1105278 0.594820320606 0.750060498714 0.155240148306 1.260987 0.00000257 1 SKI 2222339 2222566 0.065287895501 0.210770472884 0.145482569933 3.228324 0.00099704 1 SSBP3 54808203 54809175 0.705669343472 0.850281238556 0.144611850381 1.204929 0.00011770 1 LHX8 75596678 75596838 0.073201529682 0.216807767749 0.143606245518 2.961793 0.00016307 1 KIAA1026 15127758 15128056 0.740512430668 0.873886942863 0.133374482393 1.180111 0.00002315 1 VSIG8 159825403 159825777 0.745840311050 0.878305196762 0.132464885712 1.177605 0.00000036 1 NPHP4 5955443 5956507 0.800996541977 0.928378760815 0.127382203937 1.159030 0.00002881 1 CASZ1 10709968 10712574 0.670704245567 0.793546736240 0.122842475772 1.183154 0.00083162 1 ACTA1 229569885 229569903 0.055927082896 0.175449371338 0.119522288442 3.137109 0.00004477 1 MEF2D 156460048 156460730 0.109269015491 0.228688850999 0.119419842958 2.092898 0.00005646 1 KCNJ9 160049766 160052988 0.391134381294 0.507486045361 0.116351686418 1.297472 0.00137652 1 PDE4B 66258017 66258053 0.086561888456 0.200474649668 0.113912768662 2.315969 0.00054280 1 C4BPB 207262172 207262684 0.706051349640 0.814453005791 0.108401603997 1.153532 0.00060143 1 UBE4B 10238016 10242772 0.822980821133 0.921220779419 0.098239973187 1.119371 0.00000584 1 SKI 2227440 2229198 0.815416514874 0.903990983963 0.088574431837 1.108625 0.02280565 1 SSU72 1477801 1480117 0.838571071625 0.906075000763 0.067503929138 1.080499 0.00003341 1 LMX1A 165204665 165204876 0.070532180369 0.136165767908 0.065633587539 1.930548 0.00030942 1 HFM1 91852398 91853575 0.476724833250 0.537905395031 0.061180591583 1.128335 0.01357998 1 SDHB 17381241 17384711 0.843766689301 0.805479168892 -0.038287553936 0.954623 0.01870896 1 RYR2 237628476 237629493 0.919374704361 0.841987848282 -0.077386878431 0.915827 0.00052675 1 TNFRSF9 7998703 8001925 0.809658527374 0.703521966934 -0.106136545539 0.868912 0.00198047 1 FLJ37453 16163330 16163759 0.875041246414 0.761869132519 -0.113172151148 0.870667 0.00103777 1 PER3 7842204 7842571 0.818019688129 0.674460768700 -0.143558934331 0.824504 0.00031440 1 TP73 3619850 3621927 0.797622859478 0.618542969227 -0.179079890251 0.775483 0.00001842 1 DHDDS 26797393 26797802 0.421230196953 0.234313428402 -0.186916783452 0.556260 0.00006003 1 PSMB2 36108142 36108297 0.510865092278 0.305062651634 -0.205802455544 0.597149 0.00000077 1 PRDM16 3076919 3078892 0.747650563717 0.533045828342 -0.214604750276 0.712961 0.00773386 1 SFN 27189234 27189362 0.750227153301 0.524608254433 -0.225618913770 0.699266 0.00004404 1 S100A9 153330143 153330655 0.583038449287 0.282666593790 -0.300371825695 0.484816 0.00000038 1 SLC45A1 8271753 8272083 0.628552556038 0.254278898239 -0.374273657799 0.404547 0.00000066 1 CAMTA1 7307526 7308852 0.739083945751 0.335320740938 -0.403763234615 0.453698 0.00000138