Chr	Gene	Start	End	Control Avg	Tumor Avg	Delta Beta	Fold	P Value
1	CAPZB	19763994	19765307	0.265391141176	0.753293514252	0.487902343273	2.838427	0.00000067
1	HLX	221057478	221057653	0.444649606943	0.862260758877	0.417611151934	1.939192	0.00000000
1	HLX	221068565	221068895	0.390515446663	0.789840102196	0.399324655533	2.022558	0.00000202
1	ELTD1	79472202	79472459	0.286730200052	0.672350347042	0.385620146990	2.344888	0.00000021
1	DNM3	172113020	172114905	0.428421556950	0.813848972321	0.385427415371	1.899645	0.00000027
1	MIR5087	147782393	147782723	0.172339692712	0.550900340080	0.378560662270	3.196596	0.00000131
1	HLX	221055639	221055799	0.411805301905	0.785875797272	0.374070495367	1.908367	0.00000001
1	ESPN	6515500	6515704	0.219912052155	0.589922428131	0.370010375977	2.682538	0.00001140
1	LOC728989	146543961	146544127	0.342965662479	0.701646029949	0.358680337667	2.045820	0.00000448
1	CAPN2	223936719	223936918	0.207822367549	0.561854541302	0.354032158852	2.703532	0.00004236
1	B3GALT2	193154952	193155646	0.502884209156	0.856519639492	0.353635430336	1.703214	0.00021707
1	C2CD4D	151810807	151810984	0.193651944399	0.546453773975	0.352801829576	2.821835	0.00010087
1	TP73	3600249	3601365	0.156732290983	0.501056849957	0.344324558973	3.196896	0.00001124
1	BARHL2	91184863	91185316	0.234690442681	0.577861487865	0.343171060085	2.462229	0.00001677
1	HLX	221054124	221054422	0.306611955166	0.644839048386	0.338227063417	2.103111	0.00006424
1	GALNT2	230271820	230273142	0.542916119099	0.876271247864	0.333355128765	1.614008	0.00000000
1	ZBTB40	22611976	22612306	0.453421264887	0.781020462513	0.327599167824	1.722505	0.00000017
1	RUNX3	25240379	25241424	0.356931805611	0.683472037315	0.326540261507	1.914853	0.00000581
1	GSTM5	110254802	110255001	0.358015209436	0.672461450100	0.314446210861	1.878304	0.00000377
1	BCAN	156616699	156616935	0.316661506891	0.628348469734	0.311686933041	1.984291	0.00027113
1	ATAD3C	1397747	1398045	0.283401757479	0.591289937496	0.307888209820	2.086402	0.00001124
1	KCNAB2	6093949	6094461	0.393595457077	0.698515951633	0.304920494556	1.774705	0.00000179
1	RUNX3	25257537	25257813	0.234836012125	0.536344885826	0.301508873701	2.283912	0.00000000
1	LINC00210	218097482	218099533	0.259558767080	0.560629725456	0.301070988178	2.159934	0.00000179
1	GNG4	235814310	235814368	0.246026128531	0.542598903179	0.296572744846	2.205452	0.00000468
1	RSG1	16553102	16553432	0.270150125027	0.562578260899	0.292428165674	2.082465	0.00000689
1	LOC388692	149169033	149171292	0.228844895959	0.519808828831	0.290963947773	2.271446	0.00000347
1	RPL22	6260282	6260437	0.484275609255	0.768638014793	0.284362435341	1.587191	0.00000060
1	BARHL2	91190086	91190531	0.178137794137	0.461494088173	0.283356279135	2.590658	0.00000307
1	SPSB1	9400436	9401031	0.553761363029	0.836400866508	0.282639503479	1.510399	0.00033785
1	LOC388692	149155610	149156014	0.198257282376	0.480676472187	0.282419204712	2.424509	0.00002859
1	PTPRF	44085715	44089801	0.456640422344	0.738946735859	0.282306283712	1.618224	0.00001256
1	RUNX3	25253939	25254298	0.536074340343	0.817922472954	0.281848132610	1.525763	0.00001620
1	WARS2	119535899	119536229	0.146992340684	0.427180498838	0.280188143253	2.906141	0.00000231
1	COL9A2	40769589	40769824	0.564788460732	0.844858467579	0.280069977045	1.495885	0.00000219
1	NR5A2	199716289	199718404	0.523133099079	0.802216589451	0.279083520174	1.533485	0.00000098
1	DDR2	162602277	162602789	0.176352679729	0.453774660826	0.277421981096	2.573109	0.00001763
1	PRKCZ	2106924	2108155	0.596515357494	0.873476624489	0.276961296797	1.464299	0.00008105
1	KIAA1522	33230584	33231868	0.560882747173	0.837652444839	0.276769697666	1.493454	0.00000000
1	TAL1	47692262	47695484	0.347148269415	0.622159779072	0.275011539459	1.792202	0.00000007
1	LHX8	75602766	75603074	0.120762579143	0.395516604185	0.274754047394	3.275159	0.00000503
1	KIAA1026	15255568	15256708	0.334263056517	0.607556879520	0.273293823004	1.817601	0.00104296
1	No Gene	244094786	244095018	0.291005104780	0.552908122540	0.261903047562	1.899995	0.00001888
1	CACYBP	174968025	174968208	0.332284837961	0.585793554783	0.253508716822	1.762926	0.00015938
1	COL11A1	103573733	103574730	0.148843228817	0.400756448507	0.251913219690	2.692473	0.00000800
1	DMBX1	46957614	46961084	0.235904604197	0.487441986799	0.251537412405	2.066267	0.00000257
1	FOXD3	63792018	63792404	0.291327267885	0.535632252693	0.244304955006	1.838593	0.00522484
1	PAX7	19051718	19052690	0.325425654650	0.565030217171	0.239604577422	1.736281	0.00051141
1	NDUFS2	161167963	161171185	0.431643664837	0.659464776516	0.227821126580	1.527799	0.00194629
1	KCNAB2	6105373	6106844	0.678808033466	0.906075596809	0.227267578244	1.334804	0.00000000
1	SCNM1	151137163	151137487	0.320896118879	0.547896921635	0.227000802755	1.707397	0.00028751
1	LYPLA2	24120260	24124262	0.450696349144	0.676121234894	0.225424870849	1.500170	0.00021077
1	FLJ42875	2984138	2984355	0.200448557734	0.425826966763	0.225378409028	2.124370	0.00000225
1	ELAVL4	50513645	50513663	0.069000616670	0.293691098690	0.224690467119	4.256354	0.00002914
1	SSBP3	54723191	54723489	0.717276632786	0.941595792770	0.224319115281	1.312737	0.00000492
1	LOC728448	40024485	40025718	0.551271021366	0.772109210491	0.220838174224	1.400598	0.00000086
1	MORN1	2261353	2263353	0.371897339821	0.591318607330	0.219421267509	1.590005	0.04795354
1	WNT2B	113051845	113052005	0.250113993883	0.466534614563	0.216420635581	1.865288	0.00039732
1	C1orf61	156357674	156358070	0.264627128839	0.478485286236	0.213858172297	1.808149	0.00030747
1	MIR4666A	228657462	228657792	0.181463479996	0.391080230474	0.209616765380	2.155146	0.00000127
1	LOC100129924	43250526	43250856	0.183481767774	0.385116279125	0.201634496450	2.098935	0.00008649
1	CCDC17	46089575	46089811	0.586102545261	0.777943611145	0.191841050982	1.327317	0.00000656
1	BARHL2	91193424	91197239	0.183828145266	0.367137312889	0.183309167624	1.997177	0.00050113
1	LOC388692	149193025	149195450	0.203193619847	0.382956802845	0.179763182998	1.884689	0.00000278
1	CTSK	150780302	150784304	0.659185111523	0.838867962360	0.179682895541	1.272583	0.00065455
1	SHC1	154941630	154945287	0.257281184196	0.434949129820	0.177667945623	1.690559	0.00001691
1	WARS2	119541994	119543378	0.170735254884	0.345532625914	0.174797385931	2.023792	0.00006543
1	C1orf61	156389984	156390369	0.149865806103	0.324465155602	0.174599349499	2.165038	0.00002661
1	PVRL4	161049499	161049735	0.652867853642	0.827026546001	0.174158692360	1.266759	0.00008107
1	ACOT11	55088618	55089858	0.619295001030	0.792103052139	0.172808095813	1.279040	0.00017205
1	VWA1	1376837	1378757	0.550810515881	0.723603725433	0.172793239355	1.313707	0.01130922
1	FAF1	50894450	50897986	0.085449859500	0.250591635704	0.165141776204	2.932616	0.00001256
1	KIAA1026	15271466	15272594	0.212650537491	0.371938109398	0.159287571907	1.749058	0.00000836
1	MIR429	1103520	1105278	0.594820320606	0.750060498714	0.155240148306	1.260987	0.00000257
1	SKI	2222339	2222566	0.065287895501	0.210770472884	0.145482569933	3.228324	0.00099704
1	SSBP3	54808203	54809175	0.705669343472	0.850281238556	0.144611850381	1.204929	0.00011770
1	LHX8	75596678	75596838	0.073201529682	0.216807767749	0.143606245518	2.961793	0.00016307
1	KIAA1026	15127758	15128056	0.740512430668	0.873886942863	0.133374482393	1.180111	0.00002315
1	VSIG8	159825403	159825777	0.745840311050	0.878305196762	0.132464885712	1.177605	0.00000036
1	NPHP4	5955443	5956507	0.800996541977	0.928378760815	0.127382203937	1.159030	0.00002881
1	CASZ1	10709968	10712574	0.670704245567	0.793546736240	0.122842475772	1.183154	0.00083162
1	ACTA1	229569885	229569903	0.055927082896	0.175449371338	0.119522288442	3.137109	0.00004477
1	MEF2D	156460048	156460730	0.109269015491	0.228688850999	0.119419842958	2.092898	0.00005646
1	KCNJ9	160049766	160052988	0.391134381294	0.507486045361	0.116351686418	1.297472	0.00137652
1	PDE4B	66258017	66258053	0.086561888456	0.200474649668	0.113912768662	2.315969	0.00054280
1	C4BPB	207262172	207262684	0.706051349640	0.814453005791	0.108401603997	1.153532	0.00060143
1	UBE4B	10238016	10242772	0.822980821133	0.921220779419	0.098239973187	1.119371	0.00000584
1	SKI	2227440	2229198	0.815416514874	0.903990983963	0.088574431837	1.108625	0.02280565
1	SSU72	1477801	1480117	0.838571071625	0.906075000763	0.067503929138	1.080499	0.00003341
1	LMX1A	165204665	165204876	0.070532180369	0.136165767908	0.065633587539	1.930548	0.00030942
1	HFM1	91852398	91853575	0.476724833250	0.537905395031	0.061180591583	1.128335	0.01357998
1	SDHB	17381241	17384711	0.843766689301	0.805479168892	-0.038287553936	0.954623	0.01870896
1	RYR2	237628476	237629493	0.919374704361	0.841987848282	-0.077386878431	0.915827	0.00052675
1	TNFRSF9	7998703	8001925	0.809658527374	0.703521966934	-0.106136545539	0.868912	0.00198047
1	FLJ37453	16163330	16163759	0.875041246414	0.761869132519	-0.113172151148	0.870667	0.00103777
1	PER3	7842204	7842571	0.818019688129	0.674460768700	-0.143558934331	0.824504	0.00031440
1	TP73	3619850	3621927	0.797622859478	0.618542969227	-0.179079890251	0.775483	0.00001842
1	DHDDS	26797393	26797802	0.421230196953	0.234313428402	-0.186916783452	0.556260	0.00006003
1	PSMB2	36108142	36108297	0.510865092278	0.305062651634	-0.205802455544	0.597149	0.00000077
1	PRDM16	3076919	3078892	0.747650563717	0.533045828342	-0.214604750276	0.712961	0.00773386
1	SFN	27189234	27189362	0.750227153301	0.524608254433	-0.225618913770	0.699266	0.00004404
1	S100A9	153330143	153330655	0.583038449287	0.282666593790	-0.300371825695	0.484816	0.00000038
1	SLC45A1	8271753	8272083	0.628552556038	0.254278898239	-0.374273657799	0.404547	0.00000066
1	CAMTA1	7307526	7308852	0.739083945751	0.335320740938	-0.403763234615	0.453698	0.00000138