Chr Gene Start End Control Avg Tumor Avg Delta Beta Fold P Value 1 NEGR1-IT1 72884072 72886098 0.903500974178 0.949410378933 0.045909389853 1.050813 0.00044656 1 C1orf49 178481693 178481996 0.894594073296 0.943201839924 0.048607766628 1.054335 0.00000966 1 LDLRAD2 22149783 22150151 0.893905222416 0.952630639076 0.058725401759 1.065695 0.00000001 1 PBX1 164768425 164769549 0.893061816692 0.951479315758 0.058417543769 1.065413 0.00000000 1 ZBTB18 244317949 244320011 0.889466345310 0.933261811733 0.043795458972 1.049238 0.00000172 1 MORN1 2317927 2320482 0.879115402699 0.937607109547 0.058491747826 1.066535 0.00099713 1 GLUL 182350977 182354979 0.876515090466 0.910957276821 0.034442156553 1.039294 0.03923361 1 FCRL6 159771703 159771931 0.873282194138 0.946703791618 0.073421590030 1.084075 0.00000000 1 GLIS1 54142760 54143423 0.871977567673 0.936008393764 0.064030863345 1.073432 0.00000005 1 EPHB2 23191011 23192123 0.859783589840 0.945276975632 0.085493363440 1.099436 0.00000000 1 CELA2A 15782984 15783972 0.858143866062 0.922076165676 0.063932269812 1.074501 0.00000000 1 PTPN14 214557347 214557647 0.857064545155 0.910653054714 0.053588509560 1.062526 0.00000703 1 CASZ1 10738110 10739228 0.856933236122 0.916920542717 0.059987325221 1.070002 0.00025394 1 KIAA1026 15127757 15128057 0.851862132549 0.920875430107 0.069013297558 1.081015 0.00000230 1 PRKCZ 2103764 2105613 0.847086131573 0.922185957432 0.075099833310 1.088657 0.00002829 1 HSPG2 22213651 22213951 0.846578717232 0.919295608997 0.072716891766 1.085895 0.00000004 1 RYR2 237947336 237947494 0.846561133862 0.958410561085 0.111849427223 1.132122 0.00000000 1 HTR1D 23516538 23520540 0.840932846069 0.899734973907 0.058802161366 1.069925 0.00004972 1 GJB5 35222379 35224884 0.840755283833 0.924177348614 0.083422072232 1.099223 0.00000675 1 RYR2 237628503 237629466 0.839132070541 0.926154434681 0.087022319436 1.103705 0.00000169 1 FMO3 171059803 171060326 0.838991224766 0.938320517540 0.099329292774 1.118391 0.00000000 1 RAP1GAP 21930179 21930415 0.834054768085 0.918335974216 0.084281198680 1.101050 0.00011253 1 LOC728448 40024512 40028521 0.833372652531 0.755339443684 -0.078033231199 0.906365 0.01987442 1 DESI2 244805289 244807369 0.831581413746 0.901994109154 0.070412695408 1.084673 0.00000041 1 GUCA2A 42626448 42630450 0.830491423607 0.907895684242 0.077404268086 1.093203 0.00000000 1 PRSS38 227999907 228003403 0.826011896133 0.920590102673 0.094578161836 1.114500 0.00028753 1 PLXNA2 208389929 208391169 0.822196543217 0.885295450687 0.063098900020 1.076744 0.00003600 1 PRKCZ 2099286 2100894 0.819815397263 0.904394865036 0.084579505026 1.103169 0.00000011 1 AJAP1 4835121 4839123 0.819344460964 0.911122560501 0.091778092086 1.112014 0.00000720 1 FLJ40434 53903915 53904238 0.817869365215 0.938997209072 0.121127858758 1.148102 0.00000018 1 DCST1 155006105 155006615 0.815035641193 0.900489687920 0.085454046726 1.104847 0.00000001 1 GUCA2B 42505776 42507897 0.812016069889 0.898111641407 0.086095549166 1.106027 0.00000234 1 MAP1LC3C 242119720 242122981 0.810959219933 0.906800746918 0.095841579139 1.118183 0.00000001 1 CASZ1 10732413 10733936 0.808478415012 0.882984161377 0.074505768716 1.092156 0.00000000 1 MEGF6 3435958 3436116 0.808253049850 0.898735225201 0.090482182801 1.111948 0.00001999 1 RNU5E-1 80960851 80962824 0.807277143002 0.870798647404 0.063521459699 1.078686 0.00000009 1 ZNF691 43316621 43317650 0.803401052952 0.937307178974 0.133906111121 1.166674 0.00000000 1 OBSCN 228509617 228509775 0.800720095634 0.925312459469 0.124592386186 1.155600 0.00000004 1 CAMTA1 7184128 7185242 0.800402104855 0.901387453079 0.100985348225 1.126168 0.00000000 1 MORN1 2287840 2288922 0.799609601498 0.896658182144 0.097048573196 1.121370 0.00007793 1 BEND5 49224366 49225354 0.792088210583 0.937443494797 0.145355254412 1.183509 0.00000000 1 PRKCZ 1987813 1989635 0.790692746639 0.917893588543 0.127200871706 1.160873 0.00000000 1 PTPRF 44070957 44071115 0.790289998055 0.897733509541 0.107443518937 1.135955 0.00005277 1 PRKCZ 2000003 2003752 0.787640810013 0.902412831783 0.114772006869 1.145716 0.00000000 1 OPTC 203462351 203462579 0.786744177341 0.922809064388 0.136064901948 1.172947 0.00000000 1 LOC100133612 3830580 3831773 0.786055684090 0.892843842506 0.106788173318 1.135853 0.00000002 1 OBSCN 228473854 228474012 0.783538162708 0.905776083469 0.122237935662 1.156008 0.00000000 1 PLEKHG5 6565679 6566987 0.781898677349 0.917478501797 0.135579839349 1.173398 0.00000000 1 MEGF6 3523557 3525327 0.780357062817 0.890188574791 0.109831467271 1.140745 0.00000289 1 LOC149134 246953438 246956934 0.778913199902 0.888962566853 0.110049337149 1.141286 0.00000288 1 CAMTA1 7293759 7294677 0.778072237968 0.913914144039 0.135841906071 1.174588 0.00000000 1 ACTRT2 2886709 2886951 0.774272084236 0.887694835663 0.113422803581 1.146490 0.00001990 1 CAMTA1 7318446 7319707 0.773123204708 0.905406057835 0.132282882929 1.171102 0.00000000 1 GLIS1 54198180 54201470 0.766739964485 0.863446474075 0.096706517041 1.126127 0.00341034 1 CAMTA1 7710260 7711538 0.765883624554 0.888557136059 0.122673518956 1.160173 0.00000007 1 No Gene 244090710 244094206 0.765603065491 0.863013803959 0.097410731018 1.127234 0.00000002 1 EFCAB2 245284586 245290471 0.761530935764 0.904341757298 0.142810806632 1.187531 0.00000053 1 MORN1 2270057 2274763 0.761157929897 0.895462989807 0.134305074811 1.176448 0.00000000 1 ARHGEF10L 17949484 17949683 0.760417521000 0.850390195847 0.089972704649 1.118320 0.00000115 1 CHIT1 203199719 203200026 0.760059773922 0.916492938995 0.156433150172 1.205817 0.00000002 1 NGF 115826678 115830680 0.759622037411 0.899737179279 0.140115112066 1.184454 0.00000000 1 KIF26B 245726668 245728117 0.759398937225 0.881506025791 0.122107066214 1.160794 0.00000001 1 PLA2G2F 20465104 20465332 0.759044706821 0.891361415386 0.132316708565 1.174320 0.00001294 1 TMEM51 15544371 15548373 0.758433222771 0.867199897766 0.108766652644 1.143410 0.00007932 1 PRKCZ 2042116 2045498 0.755809664726 0.892813742161 0.137004062533 1.181268 0.00661667 1 MIR4417 5539040 5541868 0.755764961243 0.879762470722 0.123997539282 1.164069 0.00000874 1 MEGF6 3495152 3497007 0.754014372826 0.900715887547 0.146701499820 1.194561 0.00000000 1 PLCH2 2427621 2428539 0.750474631786 0.894745469093 0.144270837307 1.192239 0.00000052 1 SLC2A7 9085687 9086605 0.749027609825 0.895825862885 0.146798267961 1.195985 0.00000000 1 CRP 159680496 159684498 0.747547566891 0.891144156456 0.143596604466 1.192090 0.00000000 1 TNFRSF18 1138735 1140471 0.746103405952 0.842854499817 0.096751086414 1.129675 0.01875072 1 RSG1 16555721 16559217 0.744438827038 0.891934573650 0.147495761514 1.198130 0.00000008 1 TDRD5 179556032 179559528 0.744298338890 0.886097490788 0.141799136996 1.190514 0.00000000 1 PRDM16 3007242 3008369 0.740122675896 0.874315202236 0.134192541242 1.181311 0.00004974 1 MORN1 2259261 2259561 0.737338006496 0.892721652985 0.155383661389 1.210736 0.00000000 1 FAM163A 179714526 179718376 0.735497295856 0.896359264851 0.160861954093 1.218712 0.00000149 1 GJA5 147228208 147232210 0.734288394451 0.895847737789 0.161559343338 1.220022 0.00000000 1 GUCA2B 42619035 42619246 0.732776880264 0.892796397209 0.160019487143 1.218374 0.00000000 1 KCNT2 196578581 196582077 0.729953229427 0.901409506798 0.171456262469 1.234887 0.00000000 1 PTGFRN 117527618 117531620 0.726653456688 0.746721625328 0.020068168640 1.027617 0.00005273 1 PLCH2 2383557 2387053 0.722943603992 0.823313951492 0.100370362401 1.138836 0.00001871 1 ARHGEF10L 17943897 17945119 0.718940019608 0.891463398933 0.172523364425 1.239969 0.00000000 1 NFASC 204954165 204955901 0.715185523033 0.861492753029 0.146307244897 1.204572 0.00046055 1 KIAA1751 1870215 1873781 0.715157270432 0.829730272293 0.114572964609 1.160207 0.00019772 1 MEGF6 3424327 3424627 0.712925493717 0.913851618767 0.200926154852 1.281833 0.00000000 1 MMEL1 2540074 2542104 0.708792746067 0.843203306198 0.134410545230 1.189633 0.00001163 1 ENAH 225670514 225672822 0.706543326378 0.835326254368 0.128782927990 1.182272 0.00085298 1 LAPTM5 31231307 31231535 0.706149637699 0.889622807503 0.183473184705 1.259822 0.00000000 1 PRDM16 3044282 3045625 0.703620553017 0.854927361012 0.151306837797 1.215040 0.00003621 1 ARHGEF16 3379316 3380747 0.699428915977 0.883324921131 0.183895990252 1.262923 0.00000000 1 No Gene 1060603 1065946 0.699145257473 0.829235494137 0.130090266466 1.186070 0.00000007 1 AADACL4 12703854 12704082 0.697499215603 0.901651322842 0.204152077436 1.292691 0.00000005 1 GJB3 35250228 35250464 0.694592893124 0.846510946751 0.151918023825 1.218715 0.00000005 1 RXRG 165327520 165331016 0.693737745285 0.888958275318 0.195220544934 1.281404 0.00000000 1 GLIS1 53970002 53974004 0.691576957703 0.848372519016 0.156795576215 1.226722 0.00000027 1 TMEM52 1849011 1849379 0.690335094929 0.892810285091 0.202475205064 1.293300 0.00000000 1 MIR200B 1097015 1097434 0.685486912727 0.857962071896 0.172475144267 1.251610 0.00000000 1 MIR4689 5778245 5780301 0.684336185455 0.849326252937 0.164990067482 1.241095 0.00000978 1 GABRD 1959734 1959892 0.683877587318 0.878071188927 0.194193601608 1.283960 0.00000006 1 PRDM16 3313575 3315956 0.677914440632 0.859952867031 0.182038441300 1.268527 0.00000004 1 SLC26A9 205896700 205898004 0.675586163998 0.881872236729 0.206286057830 1.305344 0.00000000 1 ACTRT2 2898346 2901081 0.670409202576 0.826633453369 0.156224250793 1.233028 0.00000053 1 EPS8L3 110307697 110308026 0.667262434959 0.871249139309 0.203986704350 1.305707 0.00000000 1 CHD5 6190953 6192989 0.663163304329 0.832135319710 0.168972030282 1.254797 0.00000000 1 FAM78B 166037443 166041445 0.661740005016 0.846753478050 0.185013502836 1.279586 0.00000000 1 RER1 2361860 2365356 0.657087981701 0.836471498013 0.179383546114 1.272998 0.00000003 1 PLCH2 2389373 2392869 0.656768620014 0.733796954155 0.077028371394 1.117284 0.00069362 1 ARHGEF16 3383001 3384330 0.649856686592 0.871901631355 0.222044914961 1.341683 0.00000000 1 HRNR 152196342 152196852 0.647289097309 0.861546278000 0.214257180691 1.331007 0.00000001 1 MIR5087 147759315 147761540 0.645790398121 0.770842969418 0.125052556396 1.193643 0.00006235 1 KIRREL 157894309 157897318 0.644801497459 0.828965663910 0.184164136648 1.285614 0.00000116 1 C1orf226 162351517 162352482 0.639548957348 0.883803069592 0.244254112244 1.381916 0.00000000 1 MIR200B 1102444 1107923 0.638913333416 0.788182258606 0.149268954992 1.233629 0.00000000 1 KIAA1751 1876817 1880313 0.637805342674 0.809032797813 0.171227440238 1.268463 0.00000001 1 CYMP 111022717 111022945 0.637522339821 0.886254787445 0.248732417822 1.390155 0.00000000 1 PRDM2 14220524 14224020 0.636303961277 0.878278553486 0.241974592209 1.380281 0.00000000 1 LRRC38 13835004 13838500 0.635398745537 0.825497627258 0.190098881721 1.299180 0.00022877 1 ACTRT2 2798436 2801112 0.632272183895 0.792429566383 0.160157367587 1.253304 0.00001146 1 NFASC 204839564 204840130 0.632147610188 0.834503293037 0.202355697751 1.320108 0.00000000 1 PRKCZ 2020132 2024025 0.632092058659 0.781958699226 0.149866640568 1.237096 0.00000000 1 KIAA1026 15254363 15256306 0.632072389126 0.797699272633 0.165626838803 1.262038 0.00000012 1 B4GALT2 44444186 44444314 0.630296647549 0.790477514267 0.160180896521 1.254136 0.00003868 1 GABRD 1962222 1966811 0.630025565624 0.829304397106 0.199278831482 1.316303 0.00001882 1 LCE4A 152681061 152682897 0.617941379547 0.866259992123 0.248318567872 1.401848 0.00000048 1 SLAMF9 159923066 159924320 0.615599095821 0.812649786472 0.197050705552 1.320096 0.00000307 1 KIAA1751 1888231 1890081 0.609877288342 0.752884387970 0.143007114530 1.234485 0.00000001 1 ACTRT2 2934563 2938059 0.609363496304 0.781074225903 0.171710714698 1.281787 0.00000853 1 C1orf198 230992361 230993449 0.608726680279 0.719514310360 0.110787682235 1.181999 0.00000080 1 MIR765 156902855 156906857 0.605882048607 0.775575876236 0.169693842530 1.280077 0.00000018 1 TRAF5 211499556 211499712 0.605618298054 0.785838425159 0.180220171809 1.297580 0.00000000 1 ACTRT2 2822113 2826937 0.591512262821 0.655964314938 0.064452067018 1.108962 0.02208496 1 KPRP 152729073 152732363 0.589274644852 0.727319657803 0.138045042753 1.234263 0.00084509 1 CADM3 159170619 159174621 0.571846902370 0.721953153610 0.150106266141 1.262494 0.00210510 1 ACTRT2 2838845 2841226 0.569566249847 0.684371232986 0.114804998040 1.201566 0.00234905 1 ACTRT2 2953190 2955347 0.566108644009 0.794322252274 0.228213593364 1.403127 0.00007091 1 No Gene 3999207 4001518 0.564357459545 0.754278659821 0.189921230078 1.336526 0.00006235 1 C1orf170 915995 918117 0.560216605663 0.691393554211 0.131176933646 1.234154 0.00137347 1 PLCH2 2376773 2381498 0.554770529270 0.709545731544 0.154775202274 1.278990 0.00000014 1 ATF3 212688752 212689161 0.552932441235 0.723167181015 0.170234769583 1.307876 0.00000283 1 ELAVL4 50573697 50574976 0.548457384109 0.730336844921 0.181879445910 1.331620 0.00000115 1 TTLL10 1114813 1115220 0.541797697544 0.795700311661 0.253902584314 1.468630 0.00000000 1 MIR4689 5811095 5813810 0.529014527798 0.787063121796 0.258048593998 1.487791 0.00000243 1 MEGF6 3476709 3477901 0.525914013386 0.816386103630 0.290472120047 1.552319 0.00000000 1 OBSCN 228548524 228548892 0.519231140614 0.806873857975 0.287642717361 1.553978 0.00000000 1 MEF2D 156464104 156468833 0.514621078968 0.684377729893 0.169756695628 1.329867 0.00243665 1 MIR135B 205420689 205424185 0.499217897654 0.696585178375 0.197367310524 1.395353 0.00077064 1 SORT1 109940979 109941136 0.489191681147 0.331079512835 -0.158112153411 0.676789 0.00000999 1 S100A3 153521457 153521967 0.484527587891 0.782582223415 0.298054665327 1.615145 0.00001999 1 RASSF5 206729403 206729835 0.481200546026 0.804902613163 0.323702096939 1.672697 0.00000000 1 SKINTL 48450717 48454488 0.472570747137 0.718845725060 0.246274933219 1.521139 0.00002768 1 ATG4C 63249085 63249327 0.472460925579 0.260835140944 -0.211625784636 0.552078 0.00002287 1 RGS8 182641781 182642291 0.467045247555 0.765921831131 0.298876613379 1.639931 0.00000004 1 RUNX3 25291877 25292186 0.460789054632 0.726751148701 0.265962064266 1.577188 0.00000000 1 UBXN11 26644800 26648802 0.454216778278 0.672261834145 0.218045040965 1.480046 0.00051239 1 KIRREL 157959421 157962917 0.434608101845 0.648270964622 0.213662877679 1.491622 0.01700990 1 MARCKSL1 32802227 32802376 0.411185145378 0.594697952271 0.183512836695 1.446302 0.00000127 1 SEMA4A 156118539 156120536 0.396143376827 0.729850769043 0.333707362413 1.842390 0.00007932 1 MIR34A 9223085 9225294 0.365744680166 0.669669568539 0.303924888372 1.830976 0.00000072 1 RNF220 44884017 44884229 0.249899893999 0.168126344681 -0.081773549318 0.672775 0.00416936 1 LAX1 203734100 203735018 0.248433783650 0.501438617706 0.253004848957 2.018400 0.00000567 1 C1orf94 34632555 34632606 0.245163932443 0.132477924228 -0.112686000764 0.540365 0.00000091 1 LPPR4 99729762 99729798 0.227632924914 0.111684359610 -0.115948572755 0.490634 0.00007841 1 RCC2 17746359 17746747 0.210250020027 0.377014160156 0.166764155030 1.793171 0.00000681 1 HOOK1 60280024 60280170 0.196680769324 0.098342157900 -0.098338611424 0.500009 0.00000000 1 NID1 236227503 236227803 0.141874298453 0.103991389275 -0.037882916629 0.732983 0.00119320 1 C1orf173 75139444 75139516 0.140858456492 0.075202405453 -0.065656051040 0.533886 0.00000000 1 AGBL4 50489524 50489639 0.136891081929 0.060490902513 -0.076400190592 0.441891 0.00000000 1 C1orf133 210407471 210407489 0.135178282857 0.061086453497 -0.074091836810 0.451895 0.00000001 1 PTGS2 186649469 186649580 0.104891061783 0.028855277225 -0.076035782695 0.275098 0.00000000 1 PIN1P1 70033509 70033710 0.103472009301 0.047547705472 -0.055924303830 0.459522 0.00000000 1 DNAJC6 65775046 65775606 0.091134011745 0.044497784227 -0.046636227518 0.488268 0.00000000 1 CSMD2 34630717 34630923 0.081378690898 0.043790835887 -0.037587855011 0.538112 0.00000065 1 RBP7 10057260 10057355 0.046931132674 0.024646112695 -0.022285018116 0.525155 0.00000278 1 ARHGAP29 94703124 94703219 0.031529020518 0.018552651629 -0.012976367958 0.588431 0.00000560