Chr	Gene	Start	End	Control Avg	Tumor Avg	Delta Beta	Fold	P Value
1	RHOU	228872106	228872264	0.034792285413	0.819364428520	0.784572124481	23.550177	0.00000000
1	LINC00862	200271948	200272379	0.094362094998	0.714936375618	0.620574295521	7.576521	0.00000034
1	LINC00466	63538814	63541132	0.164536967874	0.771572768688	0.607035815716	4.689358	0.00000000
1	OLFM3	102312140	102313139	0.138853505254	0.738800823689	0.599947333336	5.320722	0.00000009
1	MIR4666A	228657463	228657791	0.208512455225	0.795291006565	0.586778521538	3.814118	0.00000000
1	RUNX3	25253940	25254297	0.357281863689	0.908884584904	0.551602721214	2.543887	0.00000000
1	C1orf61	156357675	156358069	0.127088010311	0.672210037708	0.545122027397	5.289327	0.00000000
1	TNFSF4	173176104	173176624	0.239270031452	0.756800711155	0.517530679703	3.162957	0.00000000
1	NPR1	153669872	153671926	0.260244846344	0.771747231483	0.511502385139	2.965466	0.00000000
1	ST6GALNAC5	77229704	77231752	0.169620752335	0.675329446793	0.505708694458	3.981408	0.00005778
1	GALNT2	230271838	230273124	0.405265241861	0.908194303513	0.502929091454	2.240987	0.00000000
1	TCTEX1D1	67217762	67217890	0.094410516322	0.586482286453	0.492071747780	6.212044	0.00009245
1	PLEKHA6	204328746	204329262	0.074255838990	0.559455275536	0.485199421644	7.534158	0.00000000
1	ZNF644	91300051	91300610	0.354205131531	0.834778845310	0.480573743582	2.356767	0.00000000
1	UBE4B	10238016	10242772	0.340856313705	0.821054100990	0.480197817087	2.408798	0.00000000
1	KIAA1522	33230602	33231781	0.363920688629	0.839546203613	0.475625514984	2.306948	0.00000000
1	SKI	2230453	2230816	0.363167047501	0.832082867622	0.468915820122	2.291185	0.00000000
1	HSD11B1	209877683	209878436	0.433213293552	0.893475472927	0.460262209177	2.062438	0.00000000
1	F3	95006303	95006599	0.405730813742	0.856273293495	0.450542509556	2.110447	0.00000000
1	PRDM2	14112704	14113698	0.448798447847	0.897251427174	0.448452979326	1.999230	0.00000000
1	KLHDC8A	205325601	205326117	0.315154671669	0.759796798229	0.444642096758	2.410869	0.00000001
1	LINC00210	218097507	218099508	0.357332974672	0.799342036247	0.442009061575	2.236967	0.00000000
1	COL16A1	32170457	32173951	0.350214183331	0.763189494610	0.412975341082	2.179208	0.00000000
1	FOXD3	63790948	63794610	0.330324470997	0.742835223675	0.412510752678	2.248805	0.00000012
1	PRRX1	170635336	170638683	0.421572387218	0.832357048988	0.410784631968	1.974411	0.00000000
1	C1orf187	11760598	11761554	0.401032060385	0.804706871510	0.403674811125	2.006590	0.00000000
1	ELAVL4	50571348	50572411	0.454009979963	0.854677021503	0.400667041540	1.882507	0.00000000
1	ZBTB18	244317952	244320008	0.498043209314	0.897034525871	0.398991316557	1.801118	0.00000000
1	SLC45A1	8377704	8377951	0.341550111771	0.730185866356	0.388635784388	2.137859	0.00000000
1	PRDM16	3056600	3056834	0.414822667837	0.796177804470	0.381355136633	1.919321	0.00000003
1	C1orf130	24882040	24882320	0.360567718744	0.739008963108	0.378441214561	2.049570	0.00010790
1	MEGF6	3473455	3474844	0.466802358627	0.834763348103	0.367960989475	1.788259	0.00000000
1	PROX1	214169444	214170844	0.557176232338	0.924001812935	0.366825610399	1.658366	0.00000000
1	PRDM16	3133295	3134630	0.451275020838	0.816562414169	0.365287363529	1.809456	0.00002881
1	MARCKSL1	32802227	32802376	0.373436301947	0.733627796173	0.360191494226	1.964533	0.00000000
1	ZNHIT6	86081516	86081844	0.550270140171	0.885853827000	0.335583686829	1.609853	0.00000000
1	PRDM16	3076911	3079411	0.470964401960	0.804919421673	0.333955019712	1.709088	0.00000000
1	SLC26A9	205897077	205898358	0.533678293228	0.863268256187	0.329589992762	1.617582	0.00000000
1	PRDM16	3276265	3278412	0.524664282799	0.851537644863	0.326873362064	1.623014	0.00000000
1	CASZ1	10839192	10839832	0.523293554783	0.840913414955	0.317619860172	1.606963	0.00000040
1	THEM5	151826041	151826249	0.561702251434	0.876034617424	0.314332395792	1.559607	0.00000000
1	MYCL	40387308	40389310	0.546472728252	0.860518455505	0.314045727253	1.574678	0.00661777
1	ACAP3	1237708	1240146	0.424111932516	0.735336065292	0.311224102974	1.733825	0.00000000
1	MORN1	2252712	2253008	0.574523687363	0.882265150547	0.307741463184	1.535646	0.00000000
1	MTOR	11181581	11182621	0.627176105976	0.929875850677	0.302699714899	1.482639	0.00000000
1	NDUFS2	161167510	161170776	0.284608274698	0.586361885071	0.301753640175	2.060242	0.00000000
1	PRDM16	3127707	3129074	0.627647697926	0.925388753414	0.297741055489	1.474376	0.00000000
1	HMGCL	24152466	24152717	0.609265923500	0.898759484291	0.289493501186	1.475151	0.00000000
1	TTLL10	1118616	1122618	0.634119689465	0.912260949612	0.278141289949	1.438626	0.00000000
1	SKI	2190831	2192126	0.637174904346	0.913416385651	0.276241451502	1.433541	0.00000000
1	B4GALT2	44445974	44446210	0.377155095339	0.652004957199	0.274849832058	1.728745	0.00000048
1	SNORD103A	31422910	31423184	0.590785562992	0.865176200867	0.274390667677	1.464451	0.00000000
1	No Gene	234666172	234668278	0.452276080847	0.724185585976	0.271909505129	1.601202	0.00000000
1	PRDM16	3041198	3043197	0.668076694012	0.938440322876	0.270363628864	1.404690	0.00000000
1	SMYD3	246581567	246582584	0.548787653446	0.817597210407	0.268809586763	1.489824	0.00000000
1	NAV1	201776426	201778099	0.640343606472	0.901749968529	0.261406332254	1.408228	0.00000000
1	GREM2	240776049	240776324	0.651460945606	0.912678062916	0.261217117310	1.400971	0.00000000
1	PARK7	8044085	8045459	0.670312762260	0.929831802845	0.259519040585	1.387161	0.00000000
1	FBLIM1	16081354	16084848	0.281089901924	0.540323674679	0.259233742952	1.922245	0.00021215
1	TFAP2E	36042907	36043093	0.553477525711	0.810211896896	0.256734400988	1.463857	0.00000007
1	ZNF644	91303908	91307402	0.553943216801	0.807529389858	0.253586143255	1.457784	0.00000000
1	SLC6A9	44482303	44483567	0.534406960011	0.787715911865	0.253308981657	1.474000	0.00000000
1	MTMR11	149902293	149904202	0.673807680607	0.924920678139	0.251113027334	1.372678	0.00000000
1	SPSB1	9400434	9401033	0.637418150902	0.882899343967	0.245481163263	1.385118	0.00000000
1	LOC115110	2483251	2484254	0.706042468548	0.951005101204	0.244962602854	1.346952	0.00000000
1	PRDM16	3073566	3073862	0.643082857132	0.882456839085	0.239374011755	1.372229	0.00000000
1	PRDM16	3070589	3070885	0.668925404549	0.901698172092	0.232772812247	1.347980	0.00000000
1	ABCA4	94560229	94561556	0.438483774662	0.668797254562	0.230313464999	1.525250	0.00045620
1	NPHP4	5955461	5957472	0.684893369675	0.904508113861	0.219614773989	1.320655	0.00000000
1	IL23R	67600008	67600475	0.636764705181	0.853308737278	0.216544046998	1.340069	0.00000055
1	LBR	225610975	225614241	0.724982976913	0.927707254887	0.202724263072	1.279626	0.00000000
1	HLX	221057479	221057652	0.723244547844	0.920580327511	0.197335809469	1.272848	0.00000000
1	RNF2	185010473	185013967	0.702457070351	0.895958185196	0.193501099944	1.275463	0.00000000
1	DESI2	244805081	244807249	0.693200647831	0.882824718952	0.189624100924	1.273549	0.00000000
1	MIR4689	5916851	5918830	0.708678543568	0.897422730923	0.188744232059	1.266333	0.00349823
1	CABC1	227172511	227177078	0.668132066727	0.856666505337	0.188534438610	1.282181	0.00000044
1	TMEM201	9665731	9668292	0.683669090271	0.872033536434	0.188364475965	1.275520	0.00000000
1	NFASC	204965532	204966703	0.733626663685	0.921066105366	0.187439456582	1.255497	0.00000005
1	NPPA	11907945	11908277	0.642611920834	0.828451275826	0.185839310288	1.289194	0.00000000
1	ZC3H11A	203765939	203770150	0.534658133984	0.713633775711	0.178975611925	1.334748	0.00000000
1	CDC7	92012572	92012900	0.765721738338	0.940381526947	0.174659773707	1.228098	0.00000000
1	RAP1GAP	21965842	21966968	0.727599918842	0.891285419464	0.163685500622	1.224966	0.00000029
1	PRDM16	3099456	3101384	0.692204177380	0.848519086838	0.156314909458	1.225822	0.00000099
1	ID3	23876793	23880287	0.760728538036	0.914859712124	0.154131188989	1.202610	0.00000000
1	C1orf61	156392284	156396360	0.712630212307	0.866524517536	0.153894290328	1.215953	0.00000000
1	SLC45A3	205631973	205632131	0.695583462715	0.845435261726	0.149851799011	1.215433	0.00000000
1	ACTRT2	2886709	2886951	0.772868812084	0.917405724525	0.144536882639	1.187013	0.00000000
1	WDR8	3559420	3559845	0.787508726120	0.930858969688	0.143350243568	1.182030	0.00000000
1	FAM20B	178991041	178994535	0.758851051331	0.870177030563	0.111325994134	1.146703	0.00000000
1	NHLH1	160336373	160336703	0.770625531673	0.877396166325	0.106770679355	1.138551	0.00000000
1	APITD1	10509928	10510967	0.780306935310	0.881118595600	0.100811660290	1.129195	0.00000000
1	PVRL4	161059069	161059585	0.774223446846	0.874251425266	0.100028015673	1.129198	0.00001721
1	RIT1	155881624	155885626	0.795078635216	0.892506003380	0.097427383065	1.122538	0.00000025
1	CLCA2	86888472	86888742	0.822870194912	0.909671425819	0.086801223457	1.105486	0.00000000
1	DUSP27	167063766	167063992	0.871062636375	0.949892282486	0.078829646111	1.090498	0.00000001
1	SLC1A7	53555302	53557076	0.816859006882	0.894125759602	0.077266782522	1.094590	0.00000651
1	ARHGEF10L	17997106	17998133	0.813915967941	0.886158406734	0.072242453694	1.088759	0.00000000
1	PRKCZ	2042128	2045486	0.855231642723	0.922427535057	0.067195892334	1.078570	0.00132694
1	PGBD5	230455630	230460272	0.869037747383	0.929217815399	0.060180038214	1.069249	0.00000290
1	RCC2	17751452	17752491	0.819481253624	0.878832519054	0.059351224452	1.072425	0.00049263
1	NPL	182760272	182763538	0.884458005428	0.938072144985	0.053614113480	1.060618	0.00011274
1	C4BPB	207262170	207262686	0.898145556450	0.949093282223	0.050947684795	1.056725	0.00000002
1	ERI3	44726769	44727781	0.912682354450	0.948046326637	0.035363916308	1.038747	0.00009641
1	MFSD4	205560795	205561150	0.061209622771	0.039640322328	-0.021569300443	0.647616	0.00006892
1	IFNLR1	24476168	24477998	0.389672249556	0.367005705833	-0.022666547447	0.941832	0.00000210
1	ANKRD34A	145473552	145473779	0.042370546609	0.017043001950	-0.025327544659	0.402237	0.00000000
1	DNAH14	225117388	225117474	0.061000093818	0.030857238919	-0.030142853037	0.505856	0.00000000
1	PTCH2	45283820	45288063	0.286806821823	0.248643353581	-0.038163471967	0.866937	0.00000000
1	S100A11	152008859	152009017	0.069779664278	0.027653804049	-0.042125862092	0.396302	0.00000000
1	OTUD7B	149981536	149981852	0.126531600952	0.078307777643	-0.048223823309	0.618879	0.00000879
1	GAS5	173836579	173836875	0.094913892448	0.035603150725	-0.059310745448	0.375110	0.00000000
1	AGRN	976089	976306	0.088128164411	0.028621325269	-0.059506833553	0.324769	0.00000000
1	No Gene	158119231	158119559	0.128564924002	0.033129829913	-0.095435097814	0.257689	0.00000000
1	HIST3H2BB	228644853	228645027	0.162016645074	0.044218648225	-0.117798000574	0.272927	0.00000000
1	ADAMTSL4	150521126	150521305	0.155049160123	0.032704703510	-0.122344449162	0.210931	0.00000000
1	PTPN14	214725809	214725937	0.178035631776	0.051085680723	-0.126949951053	0.286941	0.00000000
1	VASH2	213089201	213091155	0.381791025400	0.239566057920	-0.142224967480	0.627480	0.00004290
1	TCEA3	23751152	23751253	0.193451926112	0.048495344818	-0.144956588745	0.250684	0.00000000
1	PRDM16	3143078	3145597	0.640366077423	0.483877867460	-0.156488180161	0.755627	0.00000000
1	GNB1	1713861	1714084	0.275459349155	0.091662883759	-0.183796465397	0.332764	0.00005417
1	MAP1LC3C	242161312	242162349	0.262455523014	0.067006587982	-0.195448920131	0.255306	0.00000000
1	GNG12	68299345	68299575	0.260941594839	0.061431530863	-0.199510067701	0.235423	0.00000000
1	ZNF697	120173891	120174407	0.309333503246	0.104175962508	-0.205157533288	0.336776	0.00000000
1	S100A13	153599221	153600089	0.287556141615	0.081488505006	-0.206067621708	0.283383	0.00000000
1	UBL4B	110672605	110672933	0.293788790703	0.081372752786	-0.212416023016	0.276977	0.00000000
1	SNORD46	45242043	45242339	0.280111938715	0.058396741748	-0.221715196967	0.208476	0.00000000
1	RCC2	17746359	17746745	0.289686769247	0.067095294595	-0.222591474652	0.231613	0.00000000
1	ACTRT2	2798664	2800832	0.739275753498	0.482252717018	-0.257023066282	0.652331	0.00027481
1	OBSCN	228394376	228397731	0.755248606205	0.493737637997	-0.261510938406	0.653742	0.00001863
1	FAM19A3	113265523	113265832	0.347834199667	0.084614314139	-0.263219892979	0.243260	0.00000000
1	FLJ42875	2984139	2984354	0.464167386293	0.195024266839	-0.269143134356	0.420159	0.00000004
1	RERE	8406144	8409667	0.569407820702	0.295628607273	-0.273779183626	0.519186	0.00000039
1	ACTRT2	2837890	2840135	0.788740217686	0.512829124928	-0.275911122561	0.650188	0.00045131
1	PDE4B	66797233	66798169	0.420557022095	0.140638157725	-0.279918879271	0.334409	0.00000170
1	LMNA	156095414	156096646	0.498361408710	0.208670407534	-0.289691001177	0.418713	0.00000000
1	RNF223	999435	999763	0.375453293324	0.082609891891	-0.292843401432	0.220027	0.00000000
1	EPS15	51985195	51985323	0.416683912277	0.120229005814	-0.296454906464	0.288538	0.00000000
1	ACOT11	55088714	55089840	0.841707289219	0.538181185722	-0.303526103497	0.639392	0.00548701
1	ILDR2	166890301	166890515	0.357529520988	0.053980529308	-0.303548991680	0.150982	0.00000000
1	DMRTA2	50886841	50887048	0.411198765039	0.103387288749	-0.307811468840	0.251429	0.00000000
1	C1orf230	151693135	151693325	0.371920228004	0.046248238534	-0.325671970844	0.124350	0.00000000
1	DDR2	162602275	162602791	0.424745827913	0.092064872384	-0.332680970430	0.216753	0.00000000
1	VPS13D	12537873	12539146	0.455607414246	0.116464272141	-0.339143157005	0.255624	0.00000000
1	RUNX3	25347913	25350596	0.501086950302	0.144410103559	-0.356676876545	0.288194	0.00000000
1	NUP210L	154125951	154130042	0.648912966251	0.282181918621	-0.366731047630	0.434853	0.00000000
1	C1orf170	917616	917687	0.657396256924	0.269822120667	-0.387574106455	0.410441	0.00000132
1	DMRTA2	50893666	50897998	0.478738278151	0.087864659727	-0.390873610973	0.183534	0.00000000
1	CD58	117112468	117113002	0.545944988728	0.154692351818	-0.391252636909	0.283348	0.00000000
1	ODF2L	86861029	86861350	0.657554030418	0.265365511179	-0.392188519239	0.403565	0.00000168
1	TNFRSF25	6525970	6526152	0.625975728035	0.226362377405	-0.399613380432	0.361615	0.00000000
1	MORN1	2324141	2324288	0.548869669437	0.148771896958	-0.400097757578	0.271051	0.00000000
1	WNT4	22470226	22470407	0.514698207378	0.106460876763	-0.408237338066	0.206841	0.00000000
1	MAP3K6	27693718	27693904	0.672568500042	0.258531749249	-0.414036750793	0.384395	0.00000000
1	PSMB2	36108142	36108297	0.655880451202	0.239029616117	-0.416850835085	0.364441	0.00000000
1	CHD1L	146713895	146714083	0.554070651531	0.128945395350	-0.425125241280	0.232724	0.00000000
1	TRNAU1AP	28904686	28906662	0.801612079144	0.349361568689	-0.452250510454	0.435824	0.00000000
1	CTSK	150780302	150784304	0.752101898193	0.261783033609	-0.490318834782	0.348069	0.00000000
1	SSU72	1486181	1488332	0.730492413044	0.235353291035	-0.495139151812	0.322184	0.00000000
1	CSRP1	201476542	201476683	0.701991260052	0.203090041876	-0.498901218176	0.289306	0.00000000
1	PRDM2	14219958	14220429	0.615757882595	0.111144676805	-0.504613220692	0.180501	0.00000000
1	LOC284661	4472041	4472113	0.925519585609	0.384469568729	-0.541050016880	0.415409	0.00052764
1	PEX10	2345269	2345474	0.765958964825	0.222740456462	-0.543218493462	0.290799	0.00000000
1	SKI	2232390	2232606	0.712085723877	0.160361051559	-0.551724672318	0.225199	0.00000000
1	PRDM16	3164311	3164510	0.619464397430	0.060401450843	-0.559062898159	0.097506	0.00000000
1	SSU72	1496855	1497013	0.907369792461	0.330396533012	-0.576973259449	0.364126	0.00000000
1	GALE	24125899	24126166	0.710440576077	0.132029131055	-0.578411459923	0.185841	0.00000000
1	GALNT2	230249497	230250824	0.788519024849	0.186957120895	-0.601561903954	0.237099	0.00000000
1	C1orf113	36771717	36771857	0.784595787525	0.175003483891	-0.609592258930	0.223049	0.00000000
1	CCT3	156304769	156306612	0.736991941929	0.124268919230	-0.612723052502	0.168616	0.00000000
1	SLC45A1	8403483	8403828	0.768295347691	0.150772586465	-0.617522776127	0.196243	0.00000000
1	PRDM16	3206484	3208475	0.922110438347	0.191810548306	-0.730299949646	0.208013	0.00000000