Chr Gene Start End Control Avg Tumor Avg Delta Beta Fold P Value 1 CSRP1 201476259 201476363 0.030137108639 0.031773481518 0.001636372646 1.054298 0.01115368 1 TMEM183B 202976298 202976360 0.044926192611 0.041925124824 -0.003001070116 0.933200 0.00417978 1 FDPS 155278604 155278743 0.029574118555 0.028219984844 -0.001354132546 0.954212 0.00339096 1 INTS7 212208519 212208839 0.044391456991 0.042337480932 -0.002053977922 0.953730 0.00039176 1 RGS2 192778119 192778246 0.022918138653 0.034275900573 0.011357761919 1.495580 0.00038726 1 RD3 211688961 211689311 0.049077127129 0.047620389611 -0.001456736121 0.970317 0.00016779 1 C1orf77 153606564 153606714 0.023507308215 0.021853461862 -0.001653846237 0.929645 0.00016207 1 CD164L2 27709881 27709931 0.041796851903 0.049868647009 0.008071795106 1.193120 0.00010968 1 BPNT1 220263091 220263263 0.037811230868 0.035092819482 -0.002718411386 0.928106 0.00009400 1 ENSA 150601488 150601808 0.039883464575 0.036747518927 -0.003135945648 0.921372 0.00009276 1 WARS2 119682570 119682890 0.076043561101 0.085963889956 0.009920326993 1.130456 0.00007967 1 NDUFS5 39491848 39492613 0.030197279528 0.028029365465 -0.002167915227 0.928208 0.00007910 1 FAIM3 207082816 207082984 0.070237748325 0.082608722150 0.012370974757 1.176130 0.00007352 1 NRAS 115258979 115259473 0.035442706198 0.058928824961 0.023486118764 1.662650 0.00007223 1 LOC100128071 32827775 32827889 0.062542475760 0.082912944257 0.020370470360 1.325706 0.00004047 1 EFCAB2 245081060 245083248 0.041911792010 0.055631745607 0.013719956391 1.327353 0.00003083 1 FAM183A 43613557 43613655 0.059852164239 0.071968585253 0.012116421014 1.202439 0.00002099 1 DENND2C 115213172 115213330 0.050812754780 0.072559833527 0.021747076884 1.427985 0.00001576 1 NTNG1 107683673 107683777 0.035924002528 0.049698170274 0.013774168678 1.383425 0.00001410 1 RHOU 228872101 228872269 0.053352877498 0.071494944394 0.018142066896 1.340039 0.00001228 1 TGFB2 218519500 218519614 0.049654748291 0.055108398199 0.005453648046 1.109831 0.00001162 1 MIR3917 26202131 26202307 0.029266621917 0.032808523625 0.003541901940 1.121022 0.00000898 1 VAMP4 171711709 171711918 0.061567779630 0.058218527585 -0.003349250415 0.945601 0.00000727 1 CENPL 173793891 173793967 0.052878372371 0.047951545566 -0.004926826339 0.906827 0.00000566 1 IGSF8 160068485 160068538 0.045295137912 0.041637115180 -0.003658025991 0.919240 0.00000397 1 PAX7 18883446 18885436 0.060438528657 0.092625528574 0.032187003642 1.532558 0.00000373 1 POU3F1 38512181 38512299 0.041606161743 0.056872624904 0.015266463161 1.366928 0.00000360 1 RBBP5 205091273 205091630 0.034368898720 0.031522408128 -0.002846492222 0.917178 0.00000310 1 COA7 53167796 53169998 0.070333249867 0.117631092668 0.047297846526 1.672482 0.00000282 1 WASF2 27816568 27816711 0.056733146310 0.060332525522 0.003599378746 1.063444 0.00000166 1 AGBL4 49242740 49243094 0.025449659675 0.031508266926 0.006058608647 1.238062 0.00000165 1 GPATCH4 156570765 156571553 0.030390800908 0.029780071229 -0.000610729097 0.979904 0.00000164 1 KCNK2 215256710 215257030 0.044326759875 0.056067656726 0.011740897782 1.264872 0.00000159 1 ST6GALNAC5 77333149 77333247 0.044311236590 0.075680099428 0.031368862838 1.707921 0.00000113 1 MAD2L2 11751564 11751683 0.032691057771 0.038135580719 0.005444521550 1.166545 0.00000093 1 ARL8A 202114054 202114116 0.052294857800 0.050960320979 -0.001334534027 0.974481 0.00000063 1 CLSTN1 9884583 9884610 0.058208528906 0.067538499832 0.009329969995 1.160285 0.00000048 1 RERE 8484000 8484253 0.037484161556 0.042043700814 0.004559539724 1.121639 0.00000037 1 DNAJC6 65775041 65775209 0.044170215726 0.065734989941 0.021564772353 1.488220 0.00000036 1 C1orf95 226737606 226737979 0.074503540993 0.098748639226 0.024245100096 1.325422 0.00000035 1 RNF220 44870847 44871228 0.049471553415 0.080105222762 0.030633673072 1.619218 0.00000030 1 RBM34 235324062 235324382 0.037306111306 0.036037027836 -0.001269084867 0.965982 0.00000019 1 PYGO2 154934672 154934765 0.030120391399 0.029748914763 -0.000371476577 0.987667 0.00000017 1 CNN3 95393067 95393209 0.139093235135 0.203781574965 0.064688339829 1.465072 0.00000009 1 KIAA0907 155904000 155904168 0.032245330513 0.028039520606 -0.004205809906 0.869568 0.00000006 1 CD34 208084366 208084508 0.038159493357 0.087641596794 0.049482099712 2.296718 0.00000005 1 SLC35A3 100435491 100435609 0.063427805901 0.068990916014 0.005563108250 1.087708 0.00000005 1 STX6 180992100 180992127 0.035488277674 0.029742449522 -0.005745830014 0.838092 0.00000001 1 AIDA 222885717 222885848 0.127751901746 0.119905091822 -0.007846806198 0.938578 0.00000001 1 TARS2 150459602 150460497 0.051195196807 0.047909032553 -0.003286164952 0.935811 0.00000001 1 UFC1 161123543 161124550 0.024914946407 0.023919897154 -0.000995048322 0.960062 0.00000000 1 SLC35F3 234350243 234350411 0.070755161345 0.138395488262 0.067640326917 1.955977 0.00000000 1 SLC30A10 220101649 220101777 0.097731940448 0.294736474752 0.197004526854 3.015764 0.00000000 1 ILDR2 166890296 166890520 0.180817335844 0.386516720057 0.205699384212 2.137609 0.00000000 1 RXRG 165344729 165346943 0.088901862502 0.147659167647 0.058757305145 1.660923 0.00000000 1 OR2M5 248299327 248301407 0.676620483398 0.547077596188 -0.129542931914 0.808544 0.00000000 1 B4GALT3 161147511 161147677 0.027312748134 0.035884536803 0.008571787737 1.313838 0.00000000 1 DESI2 244893483 244893659 0.040455002338 0.125159934163 0.084704928100 3.093806 0.00000000 1 PFDN2 161087162 161087561 0.034475848079 0.030433945358 -0.004041901324 0.882761 0.00000000 1 PLD5 242687398 242687656 0.091104783118 0.295652538538 0.204547762871 3.245192 0.00000000 1 GAS5 173836567 173837231 0.033907365054 0.032165765762 -0.001741598360 0.948637 0.00000000 1 MIXL1 226411026 226411088 0.312852680683 0.382782727480 0.069930031896 1.223524 0.00000000 1 NFASC 204797436 204797637 0.058732476085 0.099181838334 0.040449362248 1.688705 0.00000000 1 MIR135B 205398803 205401048 0.147789940238 0.188622236252 0.040832299739 1.276286 0.00000000 1 MIR135B 205424884 205425095 0.062664531171 0.145968735218 0.083304211497 2.329368 0.00000000 1 G0S2 209848815 209848913 0.103296414018 0.166420057416 0.063123635948 1.611092 0.00000000 1 RASSF5 206730357 206730714 0.070468097925 0.061165846884 -0.009302249178 0.867993 0.00000000 1 ASPM 197115669 197116008 0.033416364342 0.030031116679 -0.003385249991 0.898695 0.00000000 1 NVL 224518073 224518161 0.052783146501 0.047675915062 -0.005107232369 0.903241 0.00000000 1 DEGS1 224362521 224364503 0.218298271298 0.501797199249 0.283498913050 2.298677 0.00000000 1 GJC2 228337186 228337436 0.416458576918 0.548070669174 0.131612107158 1.316027 0.00000000 1 CAMK1G 209758898 209759591 0.063920110464 0.128599241376 0.064679123461 2.011874 0.00000000 1 ACTA1 229569882 229569912 0.071060165763 0.120864935219 0.049804773182 1.700882 0.00000000 1 SYT2 202679724 202679799 0.060665890574 0.182342022657 0.121676139534 3.005676 0.00000000 1 HMCN1 185703538 185703558 0.080000877380 0.112704433501 0.032703556120 1.408790 0.00000000 1 IFI16 158979563 158980088 0.057031542063 0.120975017548 0.063943475485 2.121195 0.00000000 1 No Gene 158083280 158083520 0.065592698753 0.200547158718 0.134954452515 3.057461 0.00000000 1 SKI 2202537 2203439 0.909775912762 0.938970565796 0.029194606468 1.032090 0.00000000 1 RUNX3 25240471 25241332 0.599725544453 0.691717982292 0.091992437840 1.153391 0.00000000 1 SEPN1 26126290 26126585 0.036892492324 0.050587020814 0.013694526628 1.371201 0.00000000 1 CATSPER4 26527476 26528322 0.450737118721 0.617990255356 0.167253106833 1.371066 0.00000000 1 UBXN11 26633180 26633340 0.033646453172 0.028055049479 -0.005591401830 0.833819 0.00000000 1 WDTC1 27560819 27560845 0.041591107845 0.036114685237 -0.005476422142 0.868327 0.00000000 1 EPB41 29213586 29213739 0.037304189056 0.036516446620 -0.000787740748 0.978883 0.00000000 1 MATN1 31191384 31191721 0.036620739847 0.038858208805 0.002237469191 1.061098 0.00000000 1 TFAP2E 36042902 36043098 0.509710669518 0.638689577579 0.128978893161 1.253043 0.00000000 1 C1orf216 36173830 36174180 0.090687818825 0.147174909711 0.056487087160 1.622874 0.00000000 1 C1QB 23003402 23003578 0.833517670631 0.881427645683 0.047909967601 1.057479 0.00000000 1 HSPG2 22181706 22182554 0.919210016727 0.944225966930 0.025015940890 1.027215 0.00000000 1 PDPN 13910667 13910729 0.046696387231 0.241032093763 0.194335713983 5.161686 0.00000000 1 SKI 2230441 2230828 0.549973130226 0.716701626778 0.166728496552 1.303158 0.00000000 1 PLCH2 2425466 2426429 0.697383940220 0.614502906799 -0.082881033421 0.881154 0.00000000 1 TP73 3600341 3601273 0.374003916979 0.574760675430 0.200756728649 1.536777 0.00000000 1 ESPN 6507895 6508119 0.189912453294 0.408055812120 0.218143358827 2.148652 0.00000000 1 TAS1R1 6639659 6639841 0.060331497341 0.078937366605 0.018605869263 1.308394 0.00000000 1 SLC25A33 9599391 9599411 0.075597047806 0.059242151678 -0.016354896128 0.783657 0.00000000 1 PIK3CD 9777987 9780135 0.791899740696 0.746433079243 -0.045466654003 0.942585 0.00000000 1 PLOD1 11994314 11994515 0.041727200150 0.072337932885 0.030610736459 1.733592 0.00000000 1 TNFRSF8 12123308 12123566 0.098105132580 0.267273962498 0.169168829918 2.724363 0.00000000 1 RSPO1 38100795 38100857 0.165484294295 0.278548866510 0.113064579666 1.683234 0.00000000 1 RRAGC 39044108 39044284 0.079395219684 0.202310740948 0.122915513813 2.548148 0.00000000 1 BMP8A 39957338 39957449 0.134933635592 0.207013562322 0.072079919279 1.534188 0.00000000 1 MRPS21 150266240 150266384 0.066077850759 0.140671819448 0.074593961239 2.128880 0.00000000 1 TNFRSF4 1144383 1144899 0.377625942230 0.561944425106 0.184318453074 1.488098 0.00000000 1 VPS72 151162353 151162865 0.040562149137 0.035858724266 -0.004703423940 0.884044 0.00000000 1 PIP5K1A 151171005 151171109 0.029798589647 0.025924107060 -0.003874483285 0.869978 0.00000000 1 OAZ3 151735966 151736415 0.021518737078 0.021644329652 0.000125591294 1.005836 0.00000000 1 C2CD4D 151810803 151810988 0.366707801819 0.596843302250 0.230135500431 1.627572 0.00000000 1 TDRD10 154474518 154474538 0.070328600705 0.169413849711 0.099085249007 2.408890 0.00000000 1 TRIM46 155145848 155145927 0.063386209309 0.058252967894 -0.005133243743 0.919016 0.00000000 1 TMEM79 156252320 156253108 0.062736637890 0.060161039233 -0.002575597493 0.958946 0.00000000 1 PLEKHO1 150122986 150123306 0.070050589740 0.169784873724 0.099734283984 2.423747 0.00000000 1 RBM8A 145507282 145507702 0.083253137767 0.074460454285 -0.008792683482 0.894386 0.00000000 1 ANKRD34A 145473126 145473784 0.031433999538 0.081317879260 0.049883883446 2.586940 0.00000000 1 BMP8B 40255098 40255160 0.140448540449 0.213155403733 0.072706863284 1.517676 0.00000000 1 PPT1 40562404 40562724 0.040987044573 0.037555932999 -0.003431110177 0.916288 0.00000000 1 HPDL 45792508 45792782 0.057071931660 0.127649128437 0.070577189326 2.236636 0.00000000 1 FOXE3 47882265 47882363 0.075099602342 0.290012806654 0.214913204312 3.861709 0.00000000 1 FAF1 50894383 50898053 0.124465428293 0.242026984692 0.117561556399 1.944532 0.00000000 1 TTC22 55267195 55267364 0.155326128006 0.110059261322 -0.045266862959 0.708569 0.00000000 1 DAB1 58715447 58715605 0.095044545829 0.263522505760 0.168477967381 2.772621 0.00000000 1 PIN1P1 70033504 70033715 0.045386213809 0.075515381992 0.030129170045 1.663840 0.00000000 1 TYW3 75198716 75199322 0.070831760764 0.057338397950 -0.013493366539 0.809501 0.00000000 1 ETV3 157108605 157108874 0.056759845465 0.130895048380 0.074135206640 2.306121 0.00000000