Chr	Gene	Start	End	Control Avg	Tumor Avg	Delta Beta	Fold	P Value
1	SKI	2232390	2232606	0.169754311442	0.442041277885	0.272286951542	2.604006	0.00000520
1	LOC646627	248903274	248903351	0.574744641781	0.844196319580	0.269451737404	1.468820	0.00000003
1	PROX1	214157250	214158850	0.309075504541	0.573566973209	0.264491468668	1.855750	0.00000000
1	PRDM16	3164311	3164510	0.171517699957	0.423934906721	0.252417206764	2.471669	0.00000174
1	DNM3	172113047	172114878	0.621985554695	0.852750658989	0.230765104294	1.371014	0.00000000
1	ESRRG	217312080	217315568	0.323313027620	0.551831066608	0.228518053889	1.706801	0.00004185
1	BCAN	156616700	156616934	0.252907276154	0.462069034576	0.209161743522	1.827029	0.00002124
1	TINAGL1	32041835	32042414	0.204417437315	0.395621776581	0.191204339266	1.935362	0.00000001
1	ILDR2	166890301	166890515	0.088125400245	0.277262389660	0.189136981964	3.146226	0.00000022
1	MIR3659	38599111	38601089	0.198922052979	0.381937325001	0.183015286922	1.920035	0.00152502
1	ACTRT2	2843127	2846615	0.662529706955	0.832929491997	0.170399770141	1.257196	0.00040571
1	C1orf187	11760599	11761113	0.638948738575	0.806936502457	0.167987793684	1.262913	0.00000737
1	BCL2L15	114429356	114430274	0.685562551022	0.849645435810	0.164082884789	1.239341	0.00004621
1	PROX1	214152545	214152969	0.531046926975	0.694374322891	0.163327395916	1.307557	0.00038311
1	NPPA	11908185	11908411	0.487951368093	0.643247246742	0.155295923352	1.318261	0.00021936
1	HLX	221055640	221055798	0.624116301537	0.761898934841	0.137782663107	1.220764	0.00020409
1	C1orf83	54560542	54564544	0.629801154137	0.763154447079	0.133353292942	1.211739	0.00011801
1	CADM3	159169212	159174621	0.603409171104	0.735775947571	0.132366776466	1.219365	0.00053430
1	ESRRG	217306581	217306819	0.724252641201	0.851020634174	0.126767948270	1.175033	0.00000487
1	SNAP47	227962264	227963630	0.779308795929	0.899105489254	0.119796678424	1.153722	0.00004131
1	No Gene	1064138	1065918	0.748295366764	0.855213940144	0.106918588281	1.142883	0.00091497
1	C1orf210	43751337	43751402	0.743229925632	0.846660912037	0.103430971503	1.139164	0.00008820
1	TAGLN2	159890010	159893834	0.139213234186	0.236725300550	0.097512058914	1.700451	0.00330540
1	TP73	3619757	3621896	0.629197120667	0.691534459591	0.062337361276	1.099074	0.00060295
1	MIR4417	5539068	5541492	0.843654334545	0.891530752182	0.047876428813	1.056749	0.00097261
1	PROX1	214169453	214170700	0.850519001484	0.861759185791	0.011240210384	1.013216	0.00031727
1	TNFRSF9	7998686	8001942	0.774290919304	0.780568540096	0.006277628709	1.008108	0.01006254
1	ZC3H11A	203765944	203770145	0.827289640903	0.766805887222	-0.060483757406	0.926889	0.00000824
1	C1orf133	210407471	210407489	0.134190887213	0.073181226850	-0.061009664088	0.545352	0.00000003
1	ZSCAN20	33892234	33895722	0.899728894234	0.837386429310	-0.062342446297	0.930710	0.00028070
1	KIAA1026	15250295	15250467	0.210566744208	0.132667437196	-0.077899299562	0.630049	0.00007326
1	CDKN2C	51442596	51442924	0.156690016389	0.071135006845	-0.085555009544	0.453986	0.00000007
1	PTCH2	45283820	45288063	0.241190031171	0.130618408322	-0.110571615398	0.541558	0.00006443
1	PRDM16	3127716	3131009	0.797363877296	0.677484512329	-0.119879335165	0.849655	0.01187527
1	RUNX3	25291792	25292147	0.838745713234	0.692160248756	-0.146585464478	0.825233	0.00000000
1	C1QB	23003407	23003573	0.606220602989	0.456156343222	-0.150064244866	0.752459	0.00000613
1	CAMTA1	7307553	7308576	0.421162307262	0.265903651714	-0.155258655548	0.631357	0.00007461
1	ARHGEF16	3384368	3385464	0.719573080540	0.563028991222	-0.156544089317	0.782449	0.00005136
1	SKI	2162556	2164410	0.295551478863	0.135172709823	-0.160378783941	0.457358	0.00000000
1	PRDM16	3076954	3079720	0.639086484909	0.474291563034	-0.164794921875	0.742140	0.00004551
1	GPR37L1	202090811	202091037	0.759256422520	0.585261404514	-0.173995032907	0.770835	0.00039465
1	SKI	2202472	2203504	0.726739645004	0.546758115292	-0.179981544614	0.752344	0.00003643
1	NFASC	204839562	204840132	0.603903412819	0.422159910202	-0.181743472815	0.699052	0.00004926
1	PRDM16	3209866	3210784	0.815227329731	0.625374197960	-0.189853101969	0.767116	0.00004506
1	PRDM16	3050378	3051988	0.653190016747	0.458484470844	-0.194705545902	0.701916	0.00000978
1	PRDM16	3089432	3090350	0.629254639149	0.432460933924	-0.196793735027	0.687259	0.00261452
1	PRDM16	3044282	3045625	0.705721616745	0.497951835394	-0.207769781351	0.705592	0.00000502
1	BGLAP	156211312	156211531	0.521269440651	0.306779116392	-0.214490339160	0.588523	0.00000000
1	C1QB	22979482	22979996	0.741364955902	0.514882564545	-0.226482406259	0.694506	0.00000128
1	F3	95006303	95006599	0.585877954960	0.357306182384	-0.228571757674	0.609865	0.00021691
1	CASZ1	10839193	10839831	0.742741823196	0.514005839825	-0.228735953569	0.692038	0.00001248
1	MACF1	39920152	39921166	0.835388064384	0.586787462234	-0.248600587249	0.702413	0.00004336
1	ECE1	21586372	21587633	0.789896905422	0.525085747242	-0.264811128378	0.664752	0.00000005
1	ACOT7	6333043	6334326	0.764237821102	0.480816930532	-0.283420860767	0.629146	0.00000000
1	SKI	2230453	2230816	0.597397387028	0.275034248829	-0.322363138199	0.460387	0.00000000