| PubMed ID |
|
23410887 |
Publish Date |
|
2013 May |
| Journal |
|
Genome Research |
Species |
|
Homo sapiens |
| Disease Type |
|
Non Small-cell lung cancer |
Technology |
|
Next Generation Sequencing |
| Case Number |
|
11 |
Raw Data |
|
|
| Title |
|
Breakpoint profiling of 64 cancer genomes reveals numerous complex rearrangements spawned by homology-independent mechanisms |
| Authors |
|
Malhotra A, Lindberg M, Faust GG, Leibowitz ML, Clark RA, Layer RM, Quinlan AR, Hall IM |
| Affiliation |
|
Department of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, Virginia 22903, USA |
| Chromothripsis Definition |
|
Close-by breakpoints: >=10
Copy number states: 1-3
Fragments random joining: Yes |
| Download |
|
Study Data File |
| |
| Chromothripsis Cases |
| GBM_3_T |
| |
|
|
| |
Case ID: |
GBM_3_T |
| |
Chromosome: | 1 |
| |
Disease type: |
Glioblastoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina paired-end sequencing |
| |
Download: |
Copy Number File Links File |
|  |  | | GBM_6_T |
| |
|
|
| |
Case ID: |
GBM_6_T |
| |
Chromosome: | 1,6 |
| |
Disease type: |
Glioblastoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina paired-end sequencing |
| |
Download: |
Copy Number File Links File |
|  |  | | GBM_8_T |
| |
|
|
| |
Case ID: |
GBM_8_T |
| |
Chromosome: | 3 |
| |
Disease type: |
Glioblastoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina paired-end sequencing |
| |
Download: |
Copy Number File Links File |
|  |  | | GBM_9_T |
| |
|
|
| |
Case ID: |
GBM_9_T |
| |
Chromosome: | 9,12,21 |
| |
Disease type: |
Glioblastoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina paired-end sequencing |
| |
Download: |
Copy Number File Links File |
|  |  | | GBM_10_T |
| |
|
|
| |
Case ID: |
GBM_10_T |
| |
Chromosome: | 7,20 |
| |
Disease type: |
Glioblastoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina paired-end sequencing |
| |
Download: |
Copy Number File Links File |
|  |  | | GBM_13_T |
| |
|
|
| |
Case ID: |
GBM_13_T |
| |
Chromosome: | 1 |
| |
Disease type: |
Glioblastoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina paired-end sequencing |
| |
Download: |
Copy Number File Links File |
|  |  | | GBM_16_T |
| |
|
|
| |
Case ID: |
GBM_16_T |
| |
Chromosome: | 2,3,9,10 |
| |
Disease type: |
Glioblastoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina paired-end sequencing |
| |
Download: |
Copy Number File Links File |
|  |  | | LUAD_1_T |
| |
|
|
| |
Case ID: |
LUAD_1_T |
| |
Chromosome: | 2,17 |
| |
Disease type: |
Non Small-cell lung cancer |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina paired-end sequencing |
| |
Download: |
Copy Number File Links File |
|  |  | | LUAD_5_T |
| |
|
|
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Case ID: |
LUAD_5_T |
| |
Chromosome: | 8,20 |
| |
Disease type: |
Non Small-cell lung cancer |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina paired-end sequencing |
| |
Download: |
Copy Number File Links File |
|  |  | | LUSC_1_T |
| |
|
|
| |
Case ID: |
LUSC_1_T |
| |
Chromosome: | 3,7 |
| |
Disease type: |
Non Small-cell lung cancer |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina paired-end sequencing |
| |
Download: |
Copy Number File Links File |
|  |  | | LUSC_6_T |
| |
|
|
| |
Case ID: |
LUSC_6_T |
| |
Chromosome: | 4 |
| |
Disease type: |
Non Small-cell lung cancer |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina paired-end sequencing |
| |
Download: |
Copy Number File Links File |
|  |  | | top |
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