|
Chr |
Gene |
Start |
End |
Control Avg |
Tumor Avg |
Delta Beta |
Fold |
P Value |
UCSC
|
1 |
C1orf106 |
200862599 |
200865931 |
0.69389 |
0.85253 |
0.15864 |
1.22863 | 0.045129 |
UCSC |
1 |
C1orf61 |
156399572 |
156403066 |
0.34268 |
0.5375 |
0.19481 |
1.56849 | 0.032041 |
UCSC |
1 |
ACTRT2 |
2838848 |
2841223 |
0.72881 |
0.56918 |
-0.15962 |
0.78098 | 0.029792 |
UCSC |
1 |
KCND3 |
112437845 |
112439222 |
0.83288 |
0.90988 |
0.077 |
1.09246 | 0.026255 |
UCSC |
1 |
PRKCZ |
2083709 |
2086118 |
0.83998 |
0.91949 |
0.07951 |
1.09466 | 0.022322 |
UCSC |
1 |
VASH2 |
213089201 |
213091155 |
0.29715 |
0.68439 |
0.38724 |
2.3032 | 0.011801 |
UCSC |
1 |
CADM3 |
159170619 |
159174621 |
0.68271 |
0.5181 |
-0.16461 |
0.75889 | 0.006868 |
UCSC |
1 |
PLXNA2 |
208217524 |
208218551 |
0.8419 |
0.91448 |
0.07257 |
1.0862 | 0.002039 |
UCSC |
1 |
FAM5B |
177225374 |
177226364 |
0.34811 |
0.51044 |
0.16232 |
1.4663 | 0.001817 |
UCSC |
1 |
OLFML3 |
114521968 |
114522920 |
0.45514 |
0.66741 |
0.21227 |
1.46638 | 0.001646 |
UCSC |
1 |
BCAN |
156607776 |
156611270 |
0.56733 |
0.72074 |
0.15341 |
1.27041 | 0.001627 |
UCSC |
1 |
CTNNBIP1 |
9886064 |
9889731 |
0.7148 |
0.89138 |
0.17658 |
1.24703 | 0.001535 |
UCSC |
1 |
NPPA |
11908050 |
11908278 |
0.7088 |
0.8291 |
0.12029 |
1.16971 | 0.001304 |
UCSC |
1 |
NPR1 |
153669872 |
153671926 |
0.42459 |
0.65025 |
0.22566 |
1.53148 | 0.001278 |
UCSC |
1 |
TMEM201 |
9663919 |
9665284 |
0.83482 |
0.91289 |
0.07807 |
1.09352 | 0.001160 |
UCSC |
1 |
PLEKHG5 |
6534065 |
6535837 |
0.81599 |
0.7918 |
-0.02419 |
0.97035 | 0.001140 |
UCSC |
1 |
CHIT1 |
203199719 |
203200026 |
0.75869 |
0.89503 |
0.13634 |
1.17971 | 0.001130 |
UCSC |
1 |
TDRD5 |
179556033 |
179559527 |
0.88482 |
0.92942 |
0.0446 |
1.0504 | 0.001073 |
UCSC |
1 |
IGSF21 |
18429494 |
18432988 |
0.82588 |
0.91323 |
0.08735 |
1.10577 | 0.001070 |
UCSC |
1 |
MIR4666A |
228652417 |
228652745 |
0.17246 |
0.3921 |
0.21965 |
2.27362 | 0.000966 |
UCSC |
1 |
HLX |
221050902 |
221051352 |
0.66574 |
0.8546 |
0.18886 |
1.28368 | 0.000918 |
UCSC |
1 |
TRAF5 |
211499556 |
211499712 |
0.68009 |
0.84161 |
0.16152 |
1.2375 | 0.000886 |
UCSC |
1 |
ARHGAP30 |
161039599 |
161039777 |
0.68532 |
0.81591 |
0.13059 |
1.19055 | 0.000848 |
UCSC |
1 |
NR5A2 |
200011125 |
200011421 |
0.16483 |
0.35778 |
0.19295 |
2.17063 | 0.000841 |
UCSC |
1 |
CCT3 |
156304770 |
156306611 |
0.72245 |
0.44126 |
-0.28119 |
0.61078 | 0.000804 |
UCSC |
1 |
RUNX3 |
25291920 |
25292186 |
0.82312 |
0.89244 |
0.06932 |
1.08422 | 0.000800 |
UCSC |
1 |
GPR37L1 |
202091839 |
202091906 |
0.69505 |
0.32227 |
-0.37278 |
0.46367 | 0.000625 |
UCSC |
1 |
PRKCZ |
2105746 |
2107096 |
0.5823 |
0.80636 |
0.22406 |
1.38478 | 0.000593 |
UCSC |
1 |
TP73 |
3607018 |
3607195 |
0.55063 |
0.86738 |
0.31675 |
1.57525 | 0.000586 |
UCSC |
1 |
ARHGEF16 |
3384351 |
3385481 |
0.81906 |
0.91336 |
0.0943 |
1.11513 | 0.000576 |
UCSC |
1 |
DIRAS3 |
68512698 |
68512924 |
0.71237 |
0.84373 |
0.13136 |
1.1844 | 0.000567 |
UCSC |
1 |
INPP5B |
38412261 |
38412969 |
0.43354 |
0.66165 |
0.22811 |
1.52615 | 0.000554 |
UCSC |
1 |
PAX7 |
19043494 |
19043652 |
0.08404 |
0.28454 |
0.2005 |
3.38561 | 0.000553 |
UCSC |
1 |
PTCH2 |
45283820 |
45288063 |
0.10157 |
0.43593 |
0.33436 |
4.29178 | 0.000524 |
UCSC |
1 |
LAMB3 |
209825558 |
209825829 |
0.66171 |
0.8599 |
0.19819 |
1.29951 | 0.000461 |
UCSC |
1 |
PRDM16 |
3005853 |
3007231 |
0.83273 |
0.64824 |
-0.18449 |
0.77846 | 0.000453 |
UCSC |
1 |
VWA5B1 |
20617198 |
20617714 |
0.61935 |
0.80242 |
0.18307 |
1.29558 | 0.000434 |
UCSC |
1 |
GJB5 |
35220556 |
35221097 |
0.50086 |
0.72218 |
0.22132 |
1.44188 | 0.000430 |
UCSC |
1 |
No Gene |
1061878 |
1063708 |
0.78363 |
0.87771 |
0.09408 |
1.12006 | 0.000406 |
UCSC |
1 |
DMBX1 |
46951208 |
46951437 |
0.18072 |
0.50859 |
0.32787 |
2.81421 | 0.000401 |
UCSC |
1 |
MIR5087 |
147800110 |
147802704 |
0.59602 |
0.75926 |
0.16324 |
1.27389 | 0.000359 |
UCSC |
1 |
PLEKHO1 |
150122998 |
150123294 |
0.03334 |
0.36457 |
0.33123 |
10.93608 | 0.000351 |
UCSC |
1 |
GLIS1 |
54142757 |
54143426 |
0.88062 |
0.93987 |
0.05925 |
1.06729 | 0.000339 |
UCSC |
1 |
SAMD11 |
864127 |
865899 |
0.80135 |
0.89823 |
0.09688 |
1.1209 | 0.000336 |
UCSC |
1 |
NBL1 |
19982015 |
19986785 |
0.76065 |
0.88819 |
0.12754 |
1.16767 | 0.000333 |
UCSC |
1 |
HMGCL |
24152465 |
24152718 |
0.79209 |
0.50124 |
-0.29085 |
0.63281 | 0.000324 |
UCSC |
1 |
VSIG8 |
159824901 |
159825197 |
0.17461 |
0.35684 |
0.18223 |
2.04367 | 0.000315 |
UCSC |
1 |
ATAD3C |
1397462 |
1399234 |
0.51819 |
0.73636 |
0.21816 |
1.42101 | 0.000312 |
UCSC |
1 |
IGSF21 |
18699717 |
18701785 |
0.67637 |
0.83419 |
0.15782 |
1.23333 | 0.000303 |
UCSC |
1 |
PBXIP1 |
154911997 |
154915491 |
0.53138 |
0.77871 |
0.24733 |
1.46545 | 0.000298 |
UCSC |
1 |
AADACL4 |
12703854 |
12704082 |
0.74782 |
0.89446 |
0.14664 |
1.19608 | 0.000289 |
UCSC |
1 |
C1orf187 |
11761038 |
11761674 |
0.56599 |
0.75848 |
0.19248 |
1.34008 | 0.000280 |
UCSC |
1 |
LOC100130417 |
846632 |
850356 |
0.59877 |
0.73695 |
0.13818 |
1.23077 | 0.000278 |
UCSC |
1 |
SKI |
2230453 |
2230816 |
0.37906 |
0.70947 |
0.33041 |
1.87167 | 0.000270 |
UCSC |
1 |
FUCA1 |
24190854 |
24192919 |
0.86248 |
0.93972 |
0.07724 |
1.08956 | 0.000263 |
UCSC |
1 |
ITLN1 |
160854696 |
160855212 |
0.46554 |
0.72888 |
0.26334 |
1.56566 | 0.000239 |
UCSC |
1 |
WASF2 |
27729077 |
27731100 |
0.4573 |
0.67829 |
0.22099 |
1.48324 | 0.000239 |
UCSC |
1 |
NTNG1 |
108023287 |
108023662 |
0.40017 |
0.74952 |
0.34935 |
1.87299 | 0.000234 |
UCSC |
1 |
DNAJC6 |
65731738 |
65732034 |
0.26482 |
0.61048 |
0.34567 |
2.30529 | 0.000227 |
UCSC |
1 |
PDIA3P |
146649763 |
146649921 |
0.47014 |
0.74038 |
0.27024 |
1.57481 | 0.000225 |
UCSC |
1 |
FAM46C |
118165122 |
118166200 |
0.88067 |
0.94376 |
0.06309 |
1.07164 | 0.000216 |
UCSC |
1 |
No Gene |
158083285 |
158083451 |
0.07757 |
0.30684 |
0.22927 |
3.95576 | 0.000202 |
UCSC |
1 |
ZNF496 |
247510449 |
247512384 |
0.23282 |
0.50556 |
0.27274 |
2.17145 | 0.000196 |
UCSC |
1 |
RER1 |
2359885 |
2360101 |
0.58524 |
0.76095 |
0.17571 |
1.30023 | 0.000191 |
UCSC |
1 |
C1orf61 |
156357976 |
156358199 |
0.27985 |
0.46355 |
0.1837 |
1.65641 | 0.000184 |
UCSC |
1 |
GFI1 |
92952577 |
92952766 |
0.59522 |
0.78728 |
0.19206 |
1.32266 | 0.000162 |
UCSC |
1 |
LOC100129924 |
43250527 |
43250855 |
0.29368 |
0.60666 |
0.31298 |
2.06572 | 0.000140 |
UCSC |
1 |
KIAA1026 |
15250295 |
15250467 |
0.15941 |
0.31676 |
0.15735 |
1.9871 | 0.000130 |
UCSC |
1 |
MEGF6 |
3514035 |
3516080 |
0.26021 |
0.54918 |
0.28896 |
2.11048 | 0.000129 |
UCSC |
1 |
ACAP3 |
1237709 |
1240145 |
0.71362 |
0.87052 |
0.1569 |
1.21987 | 0.000129 |
UCSC |
1 |
PTP4A2 |
32410514 |
32410842 |
0.25102 |
0.61672 |
0.3657 |
2.45681 | 0.000123 |
UCSC |
1 |
TCTEX1D1 |
67217822 |
67217950 |
0.33135 |
0.67122 |
0.33986 |
2.0257 | 0.000122 |
UCSC |
1 |
KLHDC8A |
205325601 |
205326117 |
0.50554 |
0.77295 |
0.26741 |
1.52896 | 0.000117 |
UCSC |
1 |
APITD1 |
10490025 |
10490061 |
0.5335 |
0.27902 |
-0.25448 |
0.523 | 0.000117 |
UCSC |
1 |
SLC2A1-AS1 |
43472947 |
43473113 |
0.40978 |
0.66555 |
0.25577 |
1.62418 | 0.000114 |
UCSC |
1 |
ESRRG |
217311502 |
217311560 |
0.25936 |
0.65464 |
0.39528 |
2.52406 | 0.000110 |
UCSC |
1 |
FMO2 |
171154354 |
171154870 |
0.59614 |
0.84333 |
0.24719 |
1.41465 | 0.000108 |
UCSC |
1 |
OBSCN |
228394395 |
228394721 |
0.44858 |
0.72189 |
0.27331 |
1.60928 | 0.000107 |
UCSC |
1 |
DCST1 |
155006435 |
155007799 |
0.61868 |
0.82868 |
0.21 |
1.33944 | 0.000104 |
UCSC |
1 |
PGBD5 |
230455905 |
230461115 |
0.83142 |
0.90254 |
0.07112 |
1.08554 | 0.000089 |
UCSC |
1 |
AHDC1 |
27850426 |
27853920 |
0.42896 |
0.61494 |
0.18598 |
1.43356 | 0.000084 |
UCSC |
1 |
PRKCZ |
2058390 |
2061638 |
0.62326 |
0.82364 |
0.20038 |
1.32151 | 0.000084 |
UCSC |
1 |
HLX |
221057479 |
221057652 |
0.67804 |
0.88139 |
0.20335 |
1.2999 | 0.000077 |
UCSC |
1 |
ERI3 |
44703274 |
44704549 |
0.37837 |
0.77909 |
0.40072 |
2.05909 | 0.000070 |
UCSC |
1 |
FAM78B |
166135129 |
166135346 |
0.11611 |
0.26674 |
0.15063 |
2.29734 | 0.000063 |
UCSC |
1 |
GREM2 |
240782413 |
240784304 |
0.47805 |
0.74042 |
0.26237 |
1.54882 | 0.000062 |
UCSC |
1 |
HSD17B7 |
162791928 |
162792256 |
0.3037 |
0.67282 |
0.36913 |
2.21544 | 0.000056 |
UCSC |
1 |
SYT6 |
114696634 |
114696762 |
0.09603 |
0.3067 |
0.21067 |
3.19369 | 0.000056 |
UCSC |
1 |
S100A16 |
153581236 |
153582051 |
0.60815 |
0.8102 |
0.20205 |
1.33223 | 0.000054 |
UCSC |
1 |
ARHGEF16 |
3387437 |
3388672 |
0.68731 |
0.8781 |
0.19079 |
1.2776 | 0.000050 |
UCSC |
1 |
GSTM5 |
110254814 |
110254978 |
0.45149 |
0.70777 |
0.25627 |
1.56761 | 0.000042 |
UCSC |
1 |
SLC19A2 |
169428689 |
169430887 |
0.24268 |
0.67523 |
0.43255 |
2.78242 | 0.000041 |
UCSC |
1 |
SAMD11 |
870954 |
871112 |
0.33825 |
0.61848 |
0.28023 |
1.82846 | 0.000041 |
UCSC |
1 |
PTGFRN |
117527618 |
117532010 |
0.8185 |
0.91082 |
0.09232 |
1.11279 | 0.000035 |
UCSC |
1 |
LOC149134 |
246957947 |
246960190 |
0.7082 |
0.85186 |
0.14366 |
1.20285 | 0.000032 |
UCSC |
1 |
TCTEX1D4 |
45273714 |
45276226 |
0.44762 |
0.69537 |
0.24775 |
1.55347 | 0.000029 |
UCSC |
1 |
WARS2 |
119543212 |
119543378 |
0.14077 |
0.49185 |
0.35108 |
3.49389 | 0.000022 |
UCSC |
1 |
DNAJC6 |
65730363 |
65730612 |
0.33608 |
0.70226 |
0.36618 |
2.08958 | 0.000020 |
UCSC |
1 |
CAMK2N1 |
20798884 |
20800967 |
0.26219 |
0.63847 |
0.37629 |
2.43517 | 0.000020 |
UCSC |
1 |
PRKCZ |
2013768 |
2015104 |
0.78451 |
0.47552 |
-0.30898 |
0.60614 | 0.000020 |
UCSC |
1 |
WNT2B |
113051767 |
113052004 |
0.26859 |
0.59101 |
0.32242 |
2.20044 | 0.000020 |
UCSC |
1 |
CAMK2N1 |
20813550 |
20813730 |
0.18384 |
0.42159 |
0.23775 |
2.29323 | 0.000017 |
UCSC |
1 |
LINC00862 |
200271948 |
200272379 |
0.34006 |
0.67212 |
0.33206 |
1.97647 | 0.000015 |
UCSC |
1 |
CD34 |
208083882 |
208084219 |
0.29569 |
0.65542 |
0.35973 |
2.21659 | 0.000015 |
UCSC |
1 |
DUSP27 |
167090946 |
167091242 |
0.3269 |
0.6069 |
0.28 |
1.85655 | 0.000014 |
UCSC |
1 |
TP73 |
3614914 |
3616238 |
0.68786 |
0.91867 |
0.23081 |
1.33554 | 0.000012 |
UCSC |
1 |
DAB1 |
58715449 |
58715603 |
0.05222 |
0.20629 |
0.15407 |
3.95019 | 0.000012 |
UCSC |
1 |
PDE4B |
66258017 |
66258053 |
0.16156 |
0.47164 |
0.31008 |
2.91933 | 0.000011 |
UCSC |
1 |
HSPC157 |
22351325 |
22351489 |
0.11424 |
0.41357 |
0.29933 |
3.62012 | 0.000011 |
UCSC |
1 |
SV2A |
149889103 |
149889622 |
0.03791 |
0.22031 |
0.18241 |
5.81174 | 0.000011 |
UCSC |
1 |
TNFSF4 |
173176104 |
173176624 |
0.36546 |
0.7717 |
0.40624 |
2.11157 | 0.000010 |
UCSC |
1 |
ZBTB40 |
22676821 |
22678944 |
0.18971 |
0.52331 |
0.3336 |
2.75846 | 0.000010 |
UCSC |
1 |
UBL4B |
110672605 |
110672933 |
0.32162 |
0.73706 |
0.41543 |
2.29167 | 0.000010 |
UCSC |
1 |
FAF1 |
50894438 |
50897998 |
0.1055 |
0.43741 |
0.33191 |
4.14605 | 0.000009 |
UCSC |
1 |
LOC149134 |
246938334 |
246940414 |
0.83081 |
0.47941 |
-0.35139 |
0.57705 | 0.000008 |
UCSC |
1 |
TAGLN2 |
159890014 |
159893830 |
0.26729 |
0.59761 |
0.33032 |
2.23585 | 0.000007 |
UCSC |
1 |
PODN |
53527348 |
53527499 |
0.25524 |
0.62898 |
0.37374 |
2.46431 | 0.000007 |
UCSC |
1 |
FABP3 |
31845822 |
31845986 |
0.21335 |
0.57801 |
0.36466 |
2.70923 | 0.000005 |
UCSC |
1 |
ACOT7 |
6389997 |
6391306 |
0.58597 |
0.82991 |
0.24395 |
1.41632 | 0.000005 |
UCSC |
1 |
SKI |
2222340 |
2222565 |
0.11479 |
0.51224 |
0.39745 |
4.46241 | 0.000004 |
UCSC |
1 |
SLC2A5 |
9128601 |
9130373 |
0.23621 |
0.71829 |
0.48209 |
3.04098 | 0.000004 |
UCSC |
1 |
ZNF644 |
91300051 |
91300610 |
0.28207 |
0.63583 |
0.35377 |
2.25421 | 0.000004 |
UCSC |
1 |
CACHD1 |
64937303 |
64937599 |
0.21906 |
0.71328 |
0.49422 |
3.25606 | 0.000004 |
UCSC |
1 |
MIR5087 |
147752659 |
147752987 |
0.10395 |
0.41543 |
0.31149 |
3.99653 | 0.000002 |
UCSC |
1 |
C1orf114 |
169396845 |
169396973 |
0.12267 |
0.6515 |
0.52883 |
5.31083 | 0.000002 |
UCSC |
1 |
ACOT7 |
6445156 |
6446710 |
0.53405 |
0.77016 |
0.23611 |
1.4421 | 0.000001 |
UCSC |
1 |
BMP8B |
40255100 |
40255158 |
0.12554 |
0.47368 |
0.34814 |
3.77312 | 0.000001 |
UCSC |
1 |
RRAGC |
39023910 |
39026384 |
0.12868 |
0.50478 |
0.3761 |
3.92289 | 0.000001 |
UCSC |
1 |
TP73 |
3619332 |
3621934 |
0.63086 |
0.797 |
0.16614 |
1.26335 | 0.000001 |
UCSC |
1 |
TSPAN1 |
46632417 |
46632745 |
0.22197 |
0.62389 |
0.40191 |
2.81064 | <0.000001 |
UCSC |
1 |
RPS10P7 |
201509251 |
201509579 |
0.14337 |
0.69999 |
0.55662 |
4.88243 | <0.000001 |
UCSC |
1 |
ELTD1 |
79472203 |
79472458 |
0.31348 |
0.72886 |
0.41538 |
2.32503 | <0.000001 |
UCSC |
1 |
ARHGEF16 |
3379635 |
3383041 |
0.73322 |
0.86477 |
0.13155 |
1.17941 | <0.000001 |
UCSC |
1 |
FHL3 |
38470422 |
38470696 |
0.10198 |
0.45791 |
0.35593 |
4.49038 | <0.000001 |
UCSC |
1 |
C1orf61 |
156389984 |
156390368 |
0.16472 |
0.5909 |
0.42618 |
3.58737 | <0.000001 |
UCSC |
1 |
CASZ1 |
10731587 |
10733388 |
0.77338 |
0.50296 |
-0.27042 |
0.65035 | <0.000001 |
UCSC |
1 |
GSTM2 |
110210634 |
110210734 |
0.05328 |
0.35153 |
0.29825 |
6.59735 | <0.000001 |
UCSC |
1 |
GPR137B |
236306619 |
236306915 |
0.09509 |
0.59744 |
0.50235 |
6.28269 | <0.000001 |
UCSC |
1 |
FAM19A3 |
113265523 |
113265832 |
0.24161 |
0.61932 |
0.37771 |
2.56326 | <0.000001 |
UCSC |
1 |
MIR3671 |
65467816 |
65469085 |
0.14031 |
0.70473 |
0.56442 |
5.02253 | <0.000001 |
UCSC |
1 |
HPDL |
45792513 |
45792758 |
0.03393 |
0.37367 |
0.33974 |
11.01234 | <0.000001 |
UCSC |
1 |
PLEKHA6 |
204328585 |
204329262 |
0.27896 |
0.66115 |
0.3822 |
2.37009 | <0.000001 |
UCSC |
|
|