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  DMRs of TCGA_CESC  
 
Chromosome:  
  There are totally 151 DMRs found in chromosome 1.
Note: For small series(<30 samples), M-values are transformed into beta-values.Download table		  
 
Chr Gene Start End Control Avg Tumor Avg Delta Beta Fold P Value UCSC
1 S100A2 153535842 153536783 0.89071 0.51292 -0.37779 0.57586 0.000419 UCSC
1 LMNA 156105664 156105983 0.83166 0.91239 0.08073 1.09707 <0.000001 UCSC
1 SSBP3 54723185 54723495 0.81121 0.93723 0.12602 1.15534 <0.000001 UCSC
1 THAP3 6692330 6696393 0.80909 0.85702 0.04793 1.05924 0.000003 UCSC
1 MIR29B2 207976683 207978781 0.80767 0.90419 0.09651 1.1195 <0.000001 UCSC
1 NBL1 19982015 19986785 0.80444 0.90502 0.10058 1.12503 <0.000001 UCSC
1 SKI 2227466 2229172 0.80384 0.92046 0.11661 1.14507 <0.000001 UCSC
1 SEMA4A 156123156 156123755 0.79027 0.40945 -0.38081 0.51812 <0.000001 UCSC
1 UHMK1 162467113 162467275 0.78585 0.89679 0.11095 1.14118 <0.000001 UCSC
1 VSIG8 159825397 159825783 0.78211 0.8974 0.11529 1.1474 <0.000001 UCSC
1 PRKCZ 2001869 2003732 0.76104 0.89428 0.13325 1.17509 <0.000001 UCSC
1 OBSCN 228559001 228559238 0.76083 0.50877 -0.25206 0.66871 <0.000001 UCSC
1 LAMB3 209825554 209825830 0.7517 0.4097 -0.34199 0.54504 <0.000001 UCSC
1 GALNT2 230271870 230273092 0.75133 0.90982 0.1585 1.21096 <0.000001 UCSC
1 CASZ1 10738133 10739205 0.73325 0.87812 0.14487 1.19758 0.000007 UCSC
1 LAMB3 209799248 209799412 0.73108 0.87509 0.14402 1.19699 0.000010 UCSC
1 ACOT7 6445659 6446670 0.73042 0.42453 -0.30589 0.58121 <0.000001 UCSC
1 CASZ1 10709994 10712548 0.72476 0.85078 0.12602 1.17388 <0.000001 UCSC
1 RCC2 17749345 17751051 0.72029 0.89015 0.16986 1.23582 <0.000001 UCSC
1 C1orf106 200862588 200865942 0.70736 0.50542 -0.20193 0.71452 0.005448 UCSC
1 LINC01132 234851884 234853805 0.70734 0.91921 0.21187 1.29953 <0.000001 UCSC
1 MIR197 110140693 110142519 0.70048 0.87489 0.1744 1.24897 <0.000001 UCSC
1 SFN 27189231 27189365 0.6967 0.30615 -0.39055 0.43943 <0.000001 UCSC
1 RER1 2359882 2360104 0.69227 0.4575 -0.23477 0.66086 0.000002 UCSC
1 ARHGEF16 3396805 3398437 0.69133 0.86621 0.17488 1.25296 <0.000001 UCSC
1 C1orf177 55271820 55272009 0.67978 0.88127 0.20149 1.29641 0.000008 UCSC
1 RBP7 10056770 10056920 0.67669 0.35024 -0.32645 0.51758 0.000001 UCSC
1 LOC642587 209603748 209607750 0.67614 0.35461 -0.32154 0.52445 0.000913 UCSC
1 PTPRF 44085715 44089801 0.67029 0.84687 0.17658 1.26344 <0.000001 UCSC
1 MIR200B 1099477 1099737 0.66486 0.32682 -0.33805 0.49155 <0.000001 UCSC
1 SNAP47 227962287 227963732 0.65254 0.88738 0.23484 1.3599 <0.000001 UCSC
1 HLX 221057476 221057655 0.65045 0.89963 0.24918 1.38309 <0.000001 UCSC
1 NUP210L 154126001 154130042 0.63935 0.79023 0.15087 1.23598 0.000001 UCSC
1 No Gene 1078648 1080792 0.63924 0.38896 -0.25028 0.60848 <0.000001 UCSC
1 ELF3 201979360 201980193 0.62996 0.33201 -0.29795 0.52704 <0.000001 UCSC
1 CASZ1 10839195 10839829 0.62746 0.30141 -0.32605 0.48036 <0.000001 UCSC
1 FLAD1 154963543 154967545 0.62046 0.76449 0.14403 1.23213 0.000306 UCSC
1 HES4 939618 943402 0.62034 0.44985 -0.17049 0.72517 0.007864 UCSC
1 ARHGEF10L 17943920 17945096 0.61721 0.8546 0.23739 1.38462 <0.000001 UCSC
1 PDE4DIP 144994106 144994978 0.61719 0.7688 0.15162 1.24566 0.000022 UCSC
1 MIR200A 1102762 1107282 0.61672 0.74173 0.12501 1.20271 <0.000001 UCSC
1 PVRL4 161049497 161049737 0.61624 0.8342 0.21796 1.3537 <0.000001 UCSC
1 SAMD11 879220 879570 0.61524 0.82876 0.21352 1.34706 <0.000001 UCSC
1 KIAA0040 175121917 175124107 0.61204 0.75418 0.14214 1.23224 <0.000001 UCSC
1 HLX 221055637 221055801 0.61043 0.83684 0.22641 1.37091 <0.000001 UCSC
1 RERE 8410696 8414850 0.60946 0.74883 0.13938 1.22869 0.001829 UCSC
1 MIR5087 147800112 147802702 0.60483 0.78484 0.18001 1.29761 <0.000001 UCSC
1 S100A8 153362491 153363363 0.60126 0.34433 -0.25693 0.57268 0.000068 UCSC
1 F3 95006296 95006606 0.60004 0.29115 -0.30889 0.48521 0.000003 UCSC
1 LYPLA2 24120260 24124262 0.5979 0.75034 0.15244 1.25496 <0.000001 UCSC
1 RNF220 45103460 45104403 0.59426 0.88787 0.29362 1.4941 <0.000001 UCSC
1 CASZ1 10731627 10733466 0.59199 0.82481 0.23281 1.39327 <0.000001 UCSC
1 PVRL4 161059012 161059522 0.58025 0.3621 -0.21815 0.62404 0.000029 UCSC
1 CCT3 156304803 156306578 0.57259 0.83545 0.26286 1.45908 0.000059 UCSC
1 NR5A2 199716316 199718377 0.56674 0.83891 0.27216 1.48022 <0.000001 UCSC
1 SLC45A1 8271749 8272087 0.55591 0.25912 -0.29679 0.46612 <0.000001 UCSC
1 CASQ2 116311086 116311762 0.54591 0.82809 0.28218 1.51689 <0.000001 UCSC
1 PRKCZ 2005407 2005646 0.54507 0.82218 0.27711 1.50839 <0.000001 UCSC
1 ZRANB2-AS1 71171176 71173399 0.53253 0.75633 0.2238 1.42025 <0.000001 UCSC
1 C1orf113 36771714 36771860 0.51565 0.33676 -0.17889 0.65307 0.000080 UCSC
1 HFM1 91852445 91853525 0.51263 0.55261 0.03998 1.07799 0.012726 UCSC
1 ARHGEF10L 17845795 17847728 0.51232 0.30471 -0.20761 0.59476 <0.000001 UCSC
1 MYCL 40387310 40389308 0.51183 0.80452 0.29269 1.57186 0.022811 UCSC
1 S1PR1 101704384 101706090 0.51073 0.53449 0.02376 1.04653 0.000108 UCSC
1 KIAA1522 33230634 33231749 0.51045 0.77341 0.26296 1.51516 <0.000001 UCSC
1 COL9A2 40769587 40769826 0.49063 0.78781 0.29718 1.60571 <0.000001 UCSC
1 ACOT7 6390037 6391266 0.48479 0.82027 0.33548 1.69201 <0.000001 UCSC
1 RPL22 6260279 6260440 0.48151 0.80686 0.32535 1.67569 <0.000001 UCSC
1 GSTM4 110185919 110186130 0.47773 0.16658 -0.31115 0.34869 <0.000001 UCSC
1 SAMD11 870951 871115 0.4647 0.24172 -0.22298 0.52017 <0.000001 UCSC
1 KCNA3 111218209 111218354 0.46305 0.76144 0.29839 1.64441 <0.000001 UCSC
1 BCAN 156616697 156616937 0.45816 0.69998 0.24181 1.52779 0.000022 UCSC
1 GALE 24125895 24126170 0.4389 0.25235 -0.18655 0.57496 0.000015 UCSC
1 TMEM125 43734655 43738026 0.43488 0.42397 -0.01091 0.97491 0.001516 UCSC
1 ACTRT2 2928337 2928675 0.43398 0.78177 0.34779 1.80138 <0.000001 UCSC
1 FHL3 38465042 38469339 0.43046 0.70646 0.276 1.64116 0.000065 UCSC
1 GREM2 240782415 240784302 0.42861 0.75862 0.33001 1.76995 0.000020 UCSC
1 S100A9 153330144 153330654 0.42577 0.1829 -0.24287 0.42957 <0.000001 UCSC
1 PRDM16 3133327 3134598 0.42016 0.7194 0.29924 1.7122 0.001124 UCSC
1 ERI3 44703314 44704509 0.41076 0.7338 0.32304 1.78644 0.000007 UCSC
1 DHDDS 26797384 26797811 0.4099 0.20855 -0.20135 0.50879 <0.000001 UCSC
1 LOC728989 146543958 146544130 0.39357 0.78146 0.38789 1.98556 <0.000001 UCSC
1 C1orf54 150244684 150246390 0.3833 0.73704 0.35374 1.92286 <0.000001 UCSC
1 BARHL2 91184859 91185319 0.37766 0.6943 0.31664 1.83843 <0.000001 UCSC
1 GSTM5 110254544 110255002 0.37752 0.70429 0.32677 1.86557 <0.000001 UCSC
1 No Gene 244094783 244095021 0.37335 0.67371 0.30036 1.8045 0.000009 UCSC
1 GPR37L1 202091838 202091907 0.37285 0.77575 0.4029 2.08058 0.000542 UCSC
1 CAPZB 19764044 19765257 0.37151 0.83191 0.4604 2.23925 <0.000001 UCSC
1 TBX15 119531995 119532142 0.36918 0.66445 0.29527 1.7998 <0.000001 UCSC
1 PRKCZ 2105786 2107056 0.36558 0.75402 0.38844 2.06253 <0.000001 UCSC
1 ABCA4 94560261 94561524 0.3526 0.7092 0.35661 2.01138 <0.000001 UCSC
1 RUNX3 25240429 25241374 0.35205 0.72054 0.36849 2.04668 <0.000001 UCSC
1 GUCA2B 42611521 42611773 0.35093 0.72748 0.37655 2.07301 <0.000001 UCSC
1 LINC01132 234907313 234909427 0.35091 0.08835 -0.26256 0.25177 <0.000001 UCSC
1 LINC00210 218097509 218099506 0.3488 0.63899 0.2902 1.83199 0.000001 UCSC
1 CD58 117112461 117113009 0.34791 0.13615 -0.21177 0.39132 <0.000001 UCSC
1 RIMS3 41119887 41119993 0.34754 0.76607 0.41853 2.20424 <0.000001 UCSC
1 DNM3 172113070 172114855 0.34602 0.87069 0.52466 2.51627 <0.000001 UCSC
1 GJC2 228337371 228337881 0.33903 0.65723 0.3182 1.93854 0.000823 UCSC
1 ESPN 6515498 6515706 0.33402 0.63375 0.29973 1.89736 <0.000001 UCSC
1 LCE3A 152595764 152596110 0.33275 0.64856 0.31581 1.9491 <0.000001 UCSC
1 MEF2D 156464114 156468823 0.32653 0.61851 0.29199 1.89422 <0.000001 UCSC
1 BARHL2 91190004 91190535 0.3027 0.67606 0.37336 2.23344 <0.000001 UCSC
1 SLC27A3 153761331 153763347 0.30088 0.62518 0.3243 2.07785 0.000141 UCSC
1 ELTD1 79472200 79472461 0.29322 0.74027 0.44704 2.52457 <0.000001 UCSC
1 RUNX3 25257536 25258266 0.28899 0.70085 0.41185 2.42515 <0.000001 UCSC
1 SDCCAG8 243646163 243646477 0.28323 0.65828 0.37506 2.32423 <0.000001 UCSC
1 MIR3659 38598713 38601112 0.28238 0.61135 0.32897 2.16498 <0.000001 UCSC
1 TCTEX1D1 67217759 67217953 0.2794 0.56652 0.28712 2.02761 0.000138 UCSC
1 BARHL2 91193395 91198096 0.27432 0.61669 0.34237 2.24808 <0.000001 UCSC
1 MIR4666A 228652886 228653305 0.27325 0.66069 0.38744 2.4179 <0.000001 UCSC
1 DDR2 162602278 162602788 0.26711 0.75135 0.48424 2.81291 <0.000001 UCSC
1 WARS2 119541990 119543381 0.26408 0.60425 0.34017 2.28812 <0.000001 UCSC
1 NDUFS2 161167508 161171209 0.25523 0.60482 0.34959 2.36969 0.000026 UCSC
1 ZNF496 247510451 247512382 0.25476 0.62909 0.37434 2.4694 <0.000001 UCSC
1 PROX1 214153291 214153546 0.2527 0.58527 0.33256 2.31603 <0.000001 UCSC
1 LAMC2 183155137 183156080 0.25152 0.11778 -0.13375 0.46825 <0.000001 UCSC
1 LHX9 197887913 197888223 0.24389 0.62707 0.38318 2.57114 0.000059 UCSC
1 LOC388692 149193466 149195292 0.24345 0.50616 0.26272 2.07915 <0.000001 UCSC
1 TFAP2E 36042904 36043096 0.24335 0.63279 0.38943 2.60028 <0.000001 UCSC
1 MIR5087 147782386 147782727 0.24259 0.68662 0.44403 2.83037 <0.000001 UCSC
1 PRRX1 170635370 170639353 0.23879 0.68534 0.44655 2.87007 <0.000001 UCSC
1 TLR5 223302606 223303116 0.22296 0.57165 0.34869 2.56387 0.000026 UCSC
1 FOXD3 63795848 63796020 0.22063 0.62637 0.40575 2.83907 <0.000001 UCSC
1 CAPN2 223936717 223936920 0.21892 0.62479 0.40588 2.85403 <0.000001 UCSC
1 PROX1 214158962 214159372 0.21829 0.56385 0.34556 2.58304 0.000045 UCSC
1 C1orf70 1475110 1475420 0.21677 0.59498 0.37821 2.74471 0.000001 UCSC
1 ESRRG 217311501 217311561 0.2134 0.58851 0.37511 2.75782 0.000032 UCSC
1 PDE4B 66258017 66258053 0.20456 0.69219 0.48763 3.38377 <0.000001 UCSC
1 MKNK1-AS1 47010054 47010392 0.20269 0.59436 0.39167 2.93239 0.000011 UCSC
1 DEGS1 224362536 224364488 0.18985 0.599 0.40915 3.15511 <0.000001 UCSC
1 SKINTL 48450701 48454504 0.18685 0.64116 0.4543 3.43138 <0.000001 UCSC
1 TCTEX1D4 45273747 45276193 0.18441 0.47269 0.28828 2.56326 0.000035 UCSC
1 TTC22 55267199 55267360 0.17865 0.06194 -0.11671 0.34671 <0.000001 UCSC
1 WARS2 119535895 119536233 0.1779 0.5407 0.3628 3.03934 <0.000001 UCSC
1 PRDM16 3164308 3164513 0.17305 0.51693 0.34388 2.98712 0.000003 UCSC
1 DMRTA2 50886838 50887051 0.16319 0.54948 0.38628 3.36703 <0.000001 UCSC
1 MIR4666A 228657458 228657796 0.16194 0.55492 0.39298 3.42666 0.000001 UCSC
1 LINC00466 63538816 63541130 0.13989 0.43949 0.29959 3.14164 0.000725 UCSC
1 RXRG 165414124 165414634 0.13964 0.50241 0.36276 3.59774 0.000021 UCSC
1 GRHL3 24645232 24647044 0.1364 0.07611 -0.06029 0.55798 <0.000001 UCSC
1 DAB1 58715479 58715606 0.12539 0.49052 0.36513 3.91196 0.000024 UCSC
1 C1orf114 169396842 169396976 0.1191 0.60814 0.48905 5.10638 <0.000001 UCSC
1 ST6GALNAC5 77333149 77333247 0.11422 0.51252 0.3983 4.48712 0.000010 UCSC
1 RYR2 237206480 237206644 0.11303 0.46868 0.35566 4.14664 <0.000001 UCSC
1 MIR137HG 98512518 98517036 0.11204 0.42802 0.31598 3.82016 0.000148 UCSC
1 ELAVL4 50513644 50513664 0.11107 0.61711 0.50604 5.55614 <0.000001 UCSC
1 OR2L13 248100536 248100663 0.11013 0.54779 0.43766 4.97404 0.000005 UCSC
1 C1orf133 210407470 210407490 0.10814 0.05533 -0.05281 0.51168 <0.000001 UCSC
1 EPHA10 38230730 38230828 0.10468 0.57355 0.46887 5.47916 0.000059 UCSC
1 FH 241586930 241587403 0.07598 0.55125 0.47528 7.25545 0.000217 UCSC
 
 
© 2017 Cai Laboratory.  Last updated on 30 December 2017