|
Chr |
Gene |
Start |
End |
Control Avg |
Tumor Avg |
Delta Beta |
Fold |
P Value |
UCSC
|
1 |
TRIM58 |
248020588 |
248020745 |
0.12532 |
0.45487 |
0.32955 |
3.62967 | <0.000001 |
UCSC |
1 |
ELTD1 |
79472192 |
79472465 |
0.28709 |
0.60134 |
0.31425 |
2.09462 | <0.000001 |
UCSC |
1 |
BARHL2 |
91189990 |
91190674 |
0.21614 |
0.52813 |
0.31199 |
2.44348 | <0.000001 |
UCSC |
1 |
DMRTA2 |
50886830 |
50887059 |
0.1425 |
0.44857 |
0.30607 |
3.14792 | <0.000001 |
UCSC |
1 |
TBX15 |
119531991 |
119532146 |
0.22938 |
0.52961 |
0.30023 |
2.30888 | <0.000001 |
UCSC |
1 |
GSTM5 |
110254797 |
110255010 |
0.34206 |
0.61617 |
0.27411 |
1.80134 | <0.000001 |
UCSC |
1 |
PRRX1 |
170630214 |
170630580 |
0.16699 |
0.43406 |
0.26707 |
2.59928 | 0.000008 |
UCSC |
1 |
WARS2 |
119535881 |
119536247 |
0.16733 |
0.42554 |
0.25821 |
2.5431 | 0.000001 |
UCSC |
1 |
SKI |
2144933 |
2145459 |
0.40257 |
0.64807 |
0.2455 |
1.60984 | 0.000006 |
UCSC |
1 |
INPP5B |
38412261 |
38412969 |
0.15167 |
0.39427 |
0.24261 |
2.59958 | <0.000001 |
UCSC |
1 |
GNG4 |
235814059 |
235814374 |
0.26493 |
0.49563 |
0.2307 |
1.8708 | <0.000001 |
UCSC |
1 |
ESPN |
6515490 |
6515714 |
0.27505 |
0.50396 |
0.22891 |
1.83225 | 0.000080 |
UCSC |
1 |
TP73 |
3567684 |
3567773 |
0.28161 |
0.50957 |
0.22796 |
1.80948 | 0.000002 |
UCSC |
1 |
PROX1 |
214153285 |
214153552 |
0.16903 |
0.39622 |
0.22719 |
2.34407 | 0.000004 |
UCSC |
1 |
ZNF644 |
91300032 |
91300629 |
0.25521 |
0.48116 |
0.22595 |
1.88538 | <0.000001 |
UCSC |
1 |
BARHL2 |
91182678 |
91182784 |
0.13446 |
0.34197 |
0.20751 |
2.54333 | 0.000010 |
UCSC |
1 |
C1orf61 |
156357656 |
156358211 |
0.18374 |
0.38612 |
0.20239 |
2.10152 | <0.000001 |
UCSC |
1 |
PADI1 |
17475473 |
17475839 |
0.34802 |
0.5481 |
0.20008 |
1.57489 | 0.000039 |
UCSC |
1 |
AJAP1 |
4715410 |
4715610 |
0.09851 |
0.28899 |
0.19048 |
2.93372 | 0.000004 |
UCSC |
1 |
CNR2 |
24229441 |
24229816 |
0.2017 |
0.38761 |
0.18591 |
1.92173 | 0.000004 |
UCSC |
1 |
FAM78B |
166135118 |
166135357 |
0.14008 |
0.32379 |
0.18371 |
2.3115 | <0.000001 |
UCSC |
1 |
DEGS1 |
224362798 |
224364226 |
0.21703 |
0.3994 |
0.18237 |
1.84033 | 0.000006 |
UCSC |
1 |
LHX8 |
75602754 |
75603096 |
0.17697 |
0.35423 |
0.17726 |
2.00167 | 0.000119 |
UCSC |
1 |
PRDM16 |
3157309 |
3157651 |
0.53331 |
0.71025 |
0.17694 |
1.33177 | 0.000665 |
UCSC |
1 |
BARHL2 |
91184845 |
91185325 |
0.32677 |
0.50291 |
0.17614 |
1.53904 | 0.000047 |
UCSC |
1 |
ILDR2 |
166890290 |
166890526 |
0.13067 |
0.30602 |
0.17535 |
2.34195 | <0.000001 |
UCSC |
1 |
ZNF496 |
247510713 |
247512120 |
0.25662 |
0.42229 |
0.16567 |
1.64558 | 0.000124 |
UCSC |
1 |
COL9A2 |
40769579 |
40769834 |
0.68447 |
0.84955 |
0.16507 |
1.24117 | 0.000008 |
UCSC |
1 |
TCTEX1D4 |
45273699 |
45275501 |
0.28425 |
0.44813 |
0.16388 |
1.57652 | 0.023311 |
UCSC |
1 |
PODN |
53527337 |
53527510 |
0.18543 |
0.34734 |
0.16191 |
1.87317 | <0.000001 |
UCSC |
1 |
RUNX3 |
25240516 |
25241287 |
0.49584 |
0.65699 |
0.16115 |
1.32501 | 0.000149 |
UCSC |
1 |
BARHL2 |
91193279 |
91198368 |
0.20487 |
0.36119 |
0.15632 |
1.76301 | <0.000001 |
UCSC |
1 |
ESRRG |
217309772 |
217310040 |
0.1906 |
0.34591 |
0.15531 |
1.81486 | 0.000032 |
UCSC |
1 |
TAL1 |
47695274 |
47695542 |
0.21233 |
0.36682 |
0.15449 |
1.72758 | 0.000030 |
UCSC |
1 |
ECE1 |
21586482 |
21587523 |
0.73669 |
0.88643 |
0.14974 |
1.20326 | 0.000007 |
UCSC |
1 |
TCTEX1D1 |
67217751 |
67217961 |
0.12614 |
0.26636 |
0.14022 |
2.11162 | 0.000254 |
UCSC |
1 |
RUNX3 |
25257480 |
25257634 |
0.38021 |
0.51768 |
0.13747 |
1.36155 | 0.000006 |
UCSC |
1 |
LHX8 |
75596668 |
75596848 |
0.10623 |
0.23197 |
0.12573 |
2.18355 | 0.000181 |
UCSC |
1 |
RSPO1 |
38100776 |
38100872 |
0.12595 |
0.24949 |
0.12354 |
1.98082 | 0.000002 |
UCSC |
1 |
VSIG8 |
159825381 |
159825932 |
0.72955 |
0.851 |
0.12144 |
1.16646 | 0.000001 |
UCSC |
1 |
DAB1 |
58715475 |
58715610 |
0.06921 |
0.18872 |
0.11951 |
2.72671 | 0.000165 |
UCSC |
1 |
CD34 |
208083859 |
208084242 |
0.2727 |
0.38468 |
0.11198 |
1.41063 | 0.022858 |
UCSC |
1 |
SYT2 |
202679720 |
202679803 |
0.09257 |
0.1942 |
0.10163 |
2.09794 | 0.000177 |
UCSC |
1 |
MIR137HG |
98512508 |
98516967 |
0.12616 |
0.22649 |
0.10033 |
1.79524 | <0.000001 |
UCSC |
1 |
CASZ1 |
10732523 |
10733860 |
0.75342 |
0.82943 |
0.076 |
1.10088 | 0.000543 |
UCSC |
1 |
ERI3 |
44715609 |
44716575 |
0.80426 |
0.85582 |
0.05156 |
1.06411 | 0.042098 |
UCSC |
1 |
C1orf86 |
1969075 |
1972835 |
0.87073 |
0.78566 |
-0.08507 |
0.9023 | 0.001152 |
UCSC |
1 |
TNN |
175013409 |
175015262 |
0.8558 |
0.76537 |
-0.09044 |
0.89433 | 0.002179 |
UCSC |
1 |
TNNT2 |
201347341 |
201347688 |
0.87902 |
0.78158 |
-0.09744 |
0.88915 | 0.000191 |
UCSC |
1 |
ISG15 |
941510 |
942980 |
0.86228 |
0.76346 |
-0.09882 |
0.8854 | 0.000072 |
UCSC |
1 |
LOC100130417 |
846499 |
850320 |
0.58749 |
0.47878 |
-0.10871 |
0.81496 | 0.013561 |
UCSC |
1 |
MORN1 |
2304225 |
2304405 |
0.81863 |
0.69923 |
-0.11941 |
0.85414 | 0.000116 |
UCSC |
1 |
MEGF6 |
3523524 |
3525326 |
0.88953 |
0.76993 |
-0.1196 |
0.86555 | 0.000272 |
UCSC |
1 |
KIAA1751 |
1869282 |
1873913 |
0.81298 |
0.69134 |
-0.12164 |
0.85038 | 0.000008 |
UCSC |
1 |
PLCH2 |
2383425 |
2387185 |
0.65543 |
0.53207 |
-0.12336 |
0.81178 | 0.030019 |
UCSC |
1 |
No Gene |
244090578 |
244094338 |
0.82276 |
0.69924 |
-0.12352 |
0.84987 | 0.000167 |
UCSC |
1 |
SNHG12 |
28906185 |
28906685 |
0.7532 |
0.62952 |
-0.12368 |
0.83579 | 0.001397 |
UCSC |
1 |
DHRS3 |
12609306 |
12610755 |
0.72694 |
0.60304 |
-0.12391 |
0.82955 | 0.000712 |
UCSC |
1 |
PRSS38 |
227999775 |
228003535 |
0.87623 |
0.75154 |
-0.1247 |
0.85769 | 0.000070 |
UCSC |
1 |
RGS7 |
240986618 |
240986798 |
0.91901 |
0.79407 |
-0.12494 |
0.86405 | 0.000099 |
UCSC |
1 |
NFASC |
204965651 |
204966687 |
0.88012 |
0.75252 |
-0.1276 |
0.85502 | 0.000018 |
UCSC |
1 |
LOC100133612 |
3825742 |
3827982 |
0.43785 |
0.30946 |
-0.12838 |
0.70679 | 0.000878 |
UCSC |
1 |
POGK |
166765162 |
166766703 |
0.92855 |
0.79767 |
-0.13088 |
0.85905 | 0.000049 |
UCSC |
1 |
MEGF6 |
3511958 |
3512138 |
0.85246 |
0.71988 |
-0.13259 |
0.84447 | 0.000022 |
UCSC |
1 |
GCSAML-AS1 |
247681059 |
247681425 |
0.53556 |
0.40187 |
-0.13369 |
0.75037 | 0.000440 |
UCSC |
1 |
PGBD5 |
230455630 |
230460821 |
0.84523 |
0.71049 |
-0.13474 |
0.84059 | 0.000006 |
UCSC |
1 |
RYR2 |
237947255 |
237947525 |
0.9097 |
0.77233 |
-0.13737 |
0.84899 | 0.000138 |
UCSC |
1 |
OPTC |
203462257 |
203462533 |
0.83225 |
0.69257 |
-0.13968 |
0.83217 | 0.000068 |
UCSC |
1 |
ACTRT2 |
2898613 |
2900307 |
0.80446 |
0.66335 |
-0.14111 |
0.82459 | 0.000029 |
UCSC |
1 |
MAEL |
166958273 |
166958343 |
0.87773 |
0.73579 |
-0.14195 |
0.83828 | 0.000078 |
UCSC |
1 |
SYTL1 |
27668390 |
27668476 |
0.28948 |
0.14412 |
-0.14536 |
0.49786 | 0.000054 |
UCSC |
1 |
MIR4417 |
5539307 |
5541601 |
0.84838 |
0.69705 |
-0.15132 |
0.82163 | 0.000001 |
UCSC |
1 |
GABRD |
1962090 |
1966943 |
0.79215 |
0.63989 |
-0.15226 |
0.80779 | 0.000232 |
UCSC |
1 |
PLEKHG5 |
6534050 |
6535852 |
0.73746 |
0.57927 |
-0.15819 |
0.78549 | 0.000159 |
UCSC |
1 |
S100A13 |
153600727 |
153601003 |
0.81519 |
0.65657 |
-0.15862 |
0.80542 | 0.000035 |
UCSC |
1 |
CHIT1 |
203199695 |
203200050 |
0.87802 |
0.719 |
-0.15903 |
0.81888 | 0.000163 |
UCSC |
1 |
MIR3658 |
165910639 |
165910913 |
0.91079 |
0.75005 |
-0.16074 |
0.82352 | 0.000003 |
UCSC |
1 |
MIR4689 |
5895399 |
5897304 |
0.63693 |
0.47132 |
-0.16561 |
0.73999 | 0.000103 |
UCSC |
1 |
PGLYRP3 |
153283574 |
153283850 |
0.82952 |
0.66371 |
-0.16581 |
0.80011 | 0.000179 |
UCSC |
1 |
KIF21B |
200993098 |
200996858 |
0.73328 |
0.56735 |
-0.16593 |
0.77371 | 0.000119 |
UCSC |
1 |
KIRREL |
157894576 |
157896300 |
0.82513 |
0.65885 |
-0.16628 |
0.79848 | <0.000001 |
UCSC |
1 |
PTPRU |
29675816 |
29677239 |
0.80239 |
0.63601 |
-0.16637 |
0.79265 | 0.000608 |
UCSC |
1 |
CLCC1 |
109506489 |
109510249 |
0.66145 |
0.49341 |
-0.16804 |
0.74595 | 0.000075 |
UCSC |
1 |
CADM3 |
159170619 |
159174621 |
0.5995 |
0.42765 |
-0.17185 |
0.71335 | <0.000001 |
UCSC |
1 |
IL6R |
154377289 |
154377504 |
0.3837 |
0.21157 |
-0.17212 |
0.55141 | 0.000046 |
UCSC |
1 |
PEX10 |
2345258 |
2345550 |
0.56931 |
0.395 |
-0.17431 |
0.69382 | <0.000001 |
UCSC |
1 |
ACTRT2 |
2934397 |
2938191 |
0.70479 |
0.52959 |
-0.1752 |
0.75141 | 0.000009 |
UCSC |
1 |
TMEM52 |
1857923 |
1858289 |
0.73416 |
0.55151 |
-0.18265 |
0.75121 | 0.000049 |
UCSC |
1 |
VPS13D |
12586913 |
12588567 |
0.84841 |
0.66476 |
-0.18365 |
0.78354 | 0.000141 |
UCSC |
1 |
AJAP1 |
4839939 |
4844719 |
0.87084 |
0.68532 |
-0.18552 |
0.78697 | <0.000001 |
UCSC |
1 |
ACTRT2 |
2838154 |
2840891 |
0.67098 |
0.47485 |
-0.19613 |
0.70769 | <0.000001 |
UCSC |
1 |
AJAP1 |
4832262 |
4832522 |
0.88808 |
0.69192 |
-0.19616 |
0.77912 | 0.000032 |
UCSC |
1 |
LELP1 |
153175576 |
153179578 |
0.67378 |
0.47503 |
-0.19875 |
0.70503 | 0.000378 |
UCSC |
1 |
MEGF6 |
3424306 |
3424648 |
0.88279 |
0.68388 |
-0.19891 |
0.77468 | 0.000042 |
UCSC |
1 |
RXRG |
165327388 |
165331837 |
0.76482 |
0.56552 |
-0.1993 |
0.73942 | 0.000198 |
UCSC |
1 |
CNR2 |
24239513 |
24240207 |
0.58915 |
0.38956 |
-0.19959 |
0.66123 | 0.000002 |
UCSC |
1 |
ACTRT2 |
2819342 |
2828227 |
0.7791 |
0.57888 |
-0.20022 |
0.74302 | <0.000001 |
UCSC |
1 |
KCND3 |
112525704 |
112529376 |
0.74763 |
0.53994 |
-0.20769 |
0.72221 | 0.000043 |
UCSC |
1 |
No Gene |
4230109 |
4231871 |
0.84285 |
0.63142 |
-0.21142 |
0.74916 | 0.000108 |
UCSC |
1 |
PLCH2 |
2428515 |
2429354 |
0.7325 |
0.5206 |
-0.2119 |
0.71072 | 0.000018 |
UCSC |
1 |
CHD5 |
6190920 |
6193012 |
0.78153 |
0.56774 |
-0.21379 |
0.72644 | <0.000001 |
UCSC |
1 |
TNR |
175354863 |
175355711 |
0.88213 |
0.65565 |
-0.22648 |
0.74326 | 0.000008 |
UCSC |
1 |
S100A8 |
153362578 |
153363278 |
0.627 |
0.39861 |
-0.22839 |
0.63574 | 0.000055 |
UCSC |
1 |
ALPL |
21900638 |
21901609 |
0.48653 |
0.25681 |
-0.22973 |
0.52783 | <0.000001 |
UCSC |
1 |
LCE2A |
152669706 |
152673708 |
0.5854 |
0.34568 |
-0.23972 |
0.5905 | <0.000001 |
UCSC |
1 |
OR2C3 |
247694792 |
247698464 |
0.73105 |
0.49024 |
-0.24081 |
0.6706 | <0.000001 |
UCSC |
1 |
LCE2B |
152657753 |
152661755 |
0.62684 |
0.38438 |
-0.24246 |
0.6132 | 0.000014 |
UCSC |
1 |
AJAP1 |
4735750 |
4736536 |
0.75546 |
0.50829 |
-0.24718 |
0.67282 | 0.000057 |
UCSC |
1 |
LOC646627 |
248903269 |
248903356 |
0.84871 |
0.59606 |
-0.25265 |
0.70231 | 0.000034 |
UCSC |
1 |
CACNA1E |
181382751 |
181383117 |
0.81652 |
0.56098 |
-0.25554 |
0.68704 | 0.000006 |
UCSC |
1 |
C1orf150 |
247711972 |
247712940 |
0.63932 |
0.35663 |
-0.28268 |
0.55784 | <0.000001 |
UCSC |
1 |
LCE1F |
152747334 |
152747700 |
0.6307 |
0.34609 |
-0.28462 |
0.54873 | <0.000001 |
UCSC |
1 |
SPRR1A |
152956101 |
152960103 |
0.78989 |
0.50451 |
-0.28538 |
0.63871 | <0.000001 |
UCSC |
1 |
LCE3E |
152536379 |
152540381 |
0.7045 |
0.41353 |
-0.29097 |
0.58699 | <0.000001 |
UCSC |
1 |
SPRR3 |
152973711 |
152973987 |
0.7824 |
0.48375 |
-0.29864 |
0.6183 | 0.000017 |
UCSC |
1 |
FAM78B |
166037443 |
166041445 |
0.83174 |
0.51211 |
-0.31963 |
0.61571 | <0.000001 |
UCSC |
|
|