|
Chr |
Gene |
Start |
End |
Control Avg |
Tumor Avg |
Delta Beta |
Fold |
P Value |
UCSC
|
1 |
MIR5087 |
147782392 |
147782724 |
0.14821 |
0.67784 |
0.52963 |
4.57343 | <0.000001 |
UCSC |
1 |
MAP3K6 |
27683264 |
27683467 |
0.19136 |
0.69518 |
0.50382 |
3.6329 | <0.000001 |
UCSC |
1 |
ZNF496 |
247510475 |
247512358 |
0.25636 |
0.73078 |
0.47442 |
2.85062 | <0.000001 |
UCSC |
1 |
MEGF6 |
3473462 |
3474837 |
0.14375 |
0.61449 |
0.47074 |
4.27483 | <0.000001 |
UCSC |
1 |
ZNF644 |
91300122 |
91300612 |
0.23113 |
0.69229 |
0.46116 |
2.99523 | <0.000001 |
UCSC |
1 |
CACYBP |
174968024 |
174968209 |
0.27457 |
0.72816 |
0.45359 |
2.652 | 0.000008 |
UCSC |
1 |
HLX |
221068564 |
221068896 |
0.35951 |
0.78626 |
0.42675 |
2.18702 | 0.000149 |
UCSC |
1 |
HLX |
221055638 |
221055800 |
0.39153 |
0.81553 |
0.424 |
2.08294 | <0.000001 |
UCSC |
1 |
ESPN |
6515499 |
6515705 |
0.22645 |
0.63896 |
0.41251 |
2.82167 | 0.000005 |
UCSC |
1 |
S100A16 |
153581239 |
153582048 |
0.08093 |
0.48771 |
0.40678 |
6.02605 | <0.000001 |
UCSC |
1 |
RUNX3 |
25257570 |
25258265 |
0.16411 |
0.56778 |
0.40367 |
3.45978 | <0.000001 |
UCSC |
1 |
HLX |
221057477 |
221057654 |
0.46111 |
0.85663 |
0.39552 |
1.85777 | <0.000001 |
UCSC |
1 |
TNFSF4 |
173176107 |
173176621 |
0.1781 |
0.56638 |
0.38828 |
3.1801 | 0.000071 |
UCSC |
1 |
CAPN2 |
223888753 |
223889072 |
0.09043 |
0.47775 |
0.38732 |
5.28328 | <0.000001 |
UCSC |
1 |
ZBTB40 |
22611975 |
22612307 |
0.30467 |
0.68373 |
0.37906 |
2.24419 | 0.000067 |
UCSC |
1 |
TMEM79 |
156261270 |
156261432 |
0.087 |
0.44332 |
0.35632 |
5.09573 | 0.000003 |
UCSC |
1 |
DLGAP3 |
35350662 |
35350964 |
0.21923 |
0.56607 |
0.34684 |
2.58208 | 0.000006 |
UCSC |
1 |
DDR2 |
162602278 |
162602788 |
0.0892 |
0.42811 |
0.33891 |
4.79955 | 0.000052 |
UCSC |
1 |
ATAD3C |
1397462 |
1399234 |
0.24727 |
0.58563 |
0.33835 |
2.36834 | <0.000001 |
UCSC |
1 |
HLX |
221054122 |
221054424 |
0.43177 |
0.76682 |
0.33504 |
1.77597 | 0.000098 |
UCSC |
1 |
TFAP2E |
36042905 |
36043095 |
0.321 |
0.65434 |
0.33334 |
2.03844 | 0.000180 |
UCSC |
1 |
ELTD1 |
79472201 |
79472363 |
0.43553 |
0.76589 |
0.33037 |
1.75854 | 0.000104 |
UCSC |
1 |
MIR5087 |
147752657 |
147752989 |
0.09123 |
0.40124 |
0.31001 |
4.39822 | 0.000046 |
UCSC |
1 |
KCNAB2 |
6105483 |
6106405 |
0.48202 |
0.78786 |
0.30584 |
1.63449 | 0.000072 |
UCSC |
1 |
SHC1 |
154941623 |
154945316 |
0.2261 |
0.52832 |
0.30222 |
2.33669 | 0.010345 |
UCSC |
1 |
LOC728989 |
146543960 |
146544128 |
0.23825 |
0.53545 |
0.29721 |
2.24749 | 0.000324 |
UCSC |
1 |
PLEKHG5 |
6552341 |
6554113 |
0.41495 |
0.71171 |
0.29675 |
1.71515 | 0.000384 |
UCSC |
1 |
GALE |
24125898 |
24126167 |
0.13939 |
0.43509 |
0.2957 |
3.12148 | <0.000001 |
UCSC |
1 |
GJC2 |
228337195 |
228337881 |
0.15926 |
0.45116 |
0.29189 |
2.83278 | <0.000001 |
UCSC |
1 |
SKI |
2222338 |
2222567 |
0.0659 |
0.35087 |
0.28497 |
5.32443 | 0.000128 |
UCSC |
1 |
SPOCD1 |
32281211 |
32281721 |
0.31534 |
0.59892 |
0.28358 |
1.89926 | 0.000321 |
UCSC |
1 |
LOC728448 |
40024510 |
40025693 |
0.52199 |
0.79953 |
0.27754 |
1.5317 | 0.000015 |
UCSC |
1 |
PRDM16 |
3028426 |
3028728 |
0.05284 |
0.32913 |
0.27629 |
6.22931 | <0.000001 |
UCSC |
1 |
GSTM5 |
110254813 |
110255002 |
0.44863 |
0.7126 |
0.26397 |
1.58839 | 0.000247 |
UCSC |
1 |
LOC388692 |
149297698 |
149299510 |
0.19897 |
0.4578 |
0.25882 |
2.30081 | 0.000010 |
UCSC |
1 |
SLC45A1 |
8403480 |
8403831 |
0.05216 |
0.30784 |
0.25567 |
5.90135 | 0.000010 |
UCSC |
1 |
C1orf210 |
43751336 |
43751403 |
0.09109 |
0.34656 |
0.25547 |
3.80451 | 0.000008 |
UCSC |
1 |
KIAA1026 |
15254345 |
15256588 |
0.46579 |
0.71059 |
0.2448 |
1.52556 | 0.001018 |
UCSC |
1 |
ARHGEF10L |
17845819 |
17847704 |
0.11514 |
0.35126 |
0.23613 |
3.05085 | <0.000001 |
UCSC |
1 |
OBSCN |
228394393 |
228394723 |
0.16032 |
0.3944 |
0.23408 |
2.4601 | 0.000178 |
UCSC |
1 |
MTMR11 |
149907624 |
149908861 |
0.13762 |
0.3715 |
0.23388 |
2.69939 | <0.000001 |
UCSC |
1 |
ACOT11 |
55088721 |
55089833 |
0.55259 |
0.78391 |
0.23132 |
1.41861 | 0.000355 |
UCSC |
1 |
RNF220 |
45103435 |
45104428 |
0.65062 |
0.87326 |
0.22264 |
1.34221 | <0.000001 |
UCSC |
1 |
TCTEX1D4 |
45273714 |
45276226 |
0.11696 |
0.33339 |
0.21643 |
2.85049 | <0.000001 |
UCSC |
1 |
SLC35F3 |
234350724 |
234351026 |
0.09685 |
0.31257 |
0.21573 |
3.22752 | <0.000001 |
UCSC |
1 |
DHRS3 |
12608727 |
12610993 |
0.15963 |
0.36852 |
0.20889 |
2.3086 | 0.000053 |
UCSC |
1 |
KIAA1026 |
15271491 |
15272569 |
0.13737 |
0.34568 |
0.20831 |
2.51639 | 0.000162 |
UCSC |
1 |
TAL1 |
47692233 |
47695513 |
0.45468 |
0.65741 |
0.20273 |
1.44587 | 0.002046 |
UCSC |
1 |
ACOT7 |
6445343 |
6446556 |
0.35162 |
0.55411 |
0.20248 |
1.57586 | 0.015373 |
UCSC |
1 |
SAMD11 |
870952 |
871114 |
0.08393 |
0.2826 |
0.19867 |
3.36717 | 0.000002 |
UCSC |
1 |
No Gene |
1062638 |
1065011 |
0.52364 |
0.70775 |
0.1841 |
1.35159 | 0.028858 |
UCSC |
1 |
VANGL1 |
116021036 |
116022980 |
0.15954 |
0.33743 |
0.17789 |
2.11498 | 0.001694 |
UCSC |
1 |
TTC34 |
2722126 |
2725715 |
0.23141 |
0.39333 |
0.16192 |
1.6997 | 0.000386 |
UCSC |
1 |
MXRA8 |
1295204 |
1298465 |
0.62328 |
0.78258 |
0.1593 |
1.25558 | 0.002023 |
UCSC |
1 |
KCNN3 |
154839352 |
154840444 |
0.08071 |
0.23988 |
0.15917 |
2.97211 | 0.000196 |
UCSC |
1 |
CATSPER4 |
26527409 |
26528389 |
0.03275 |
0.18502 |
0.15227 |
5.64924 | 0.000020 |
UCSC |
1 |
INPP5B |
38412264 |
38412966 |
0.08082 |
0.22922 |
0.1484 |
2.83631 | 0.000006 |
UCSC |
1 |
MIR5087 |
147800136 |
147802610 |
0.63767 |
0.77948 |
0.14181 |
1.22238 | 0.007247 |
UCSC |
1 |
KIAA1751 |
1919878 |
1921259 |
0.14113 |
0.28075 |
0.13962 |
1.98925 | 0.000158 |
UCSC |
1 |
SYTL1 |
27668394 |
27668472 |
0.05634 |
0.18071 |
0.12437 |
3.20762 | <0.000001 |
UCSC |
1 |
CTSK |
150780302 |
150784304 |
0.76984 |
0.88891 |
0.11907 |
1.15467 | 0.001049 |
UCSC |
1 |
GNG12 |
68299403 |
68299576 |
0.05171 |
0.16727 |
0.11556 |
3.23469 | 0.000002 |
UCSC |
1 |
BSND |
55464396 |
55466168 |
0.49076 |
0.59959 |
0.10883 |
1.22177 | 0.003478 |
UCSC |
1 |
SEC22B |
145090728 |
145094333 |
0.07264 |
0.18073 |
0.10809 |
2.48792 | 0.000232 |
UCSC |
1 |
TINAGL1 |
32041902 |
32042416 |
0.08086 |
0.18779 |
0.10693 |
2.32242 | <0.000001 |
UCSC |
1 |
FAM71A |
212818704 |
212821083 |
0.81215 |
0.91549 |
0.10334 |
1.12724 | 0.000021 |
UCSC |
1 |
HFM1 |
91852420 |
91853550 |
0.46208 |
0.56482 |
0.10274 |
1.22235 | 0.005360 |
UCSC |
1 |
C1orf61 |
156399562 |
156403926 |
0.09931 |
0.19981 |
0.1005 |
2.01198 | 0.000002 |
UCSC |
1 |
OAZ3 |
151737584 |
151740207 |
0.77889 |
0.87183 |
0.09294 |
1.11933 | 0.000023 |
UCSC |
1 |
PRDM16 |
3229460 |
3231070 |
0.09665 |
0.18916 |
0.0925 |
1.95708 | 0.000106 |
UCSC |
1 |
AGTRAP |
11795872 |
11796002 |
0.09362 |
0.17371 |
0.08009 |
1.85553 | 0.000037 |
UCSC |
1 |
LAMC2 |
183155183 |
183156105 |
0.05245 |
0.12962 |
0.07717 |
2.47115 | 0.000006 |
UCSC |
1 |
S100A13 |
153599449 |
153600086 |
0.06737 |
0.14198 |
0.07461 |
2.10747 | 0.000008 |
UCSC |
1 |
ALPL |
21835371 |
21835501 |
0.1044 |
0.1757 |
0.0713 |
1.683 | 0.000098 |
UCSC |
1 |
CD164L2 |
27709725 |
27709837 |
0.04526 |
0.11611 |
0.07085 |
2.56542 | 0.000109 |
UCSC |
1 |
HEATR1 |
236722618 |
236723615 |
0.87494 |
0.93954 |
0.0646 |
1.07383 | 0.000101 |
UCSC |
1 |
HOOK1 |
60280023 |
60280171 |
0.0449 |
0.09593 |
0.05103 |
2.13661 | 0.000272 |
UCSC |
1 |
DDAH1 |
85931161 |
85931291 |
0.05367 |
0.09794 |
0.04427 |
1.82486 | 0.000327 |
UCSC |
1 |
PTPN14 |
214557698 |
214558079 |
0.90992 |
0.95342 |
0.0435 |
1.04781 | 0.000008 |
UCSC |
1 |
FAM63A |
150976745 |
150980025 |
0.05984 |
0.1028 |
0.04296 |
1.71786 | 0.021488 |
UCSC |
1 |
FAIM3 |
207082819 |
207082981 |
0.04852 |
0.08945 |
0.04092 |
1.84334 | 0.000055 |
UCSC |
1 |
AMPD2 |
110167588 |
110168510 |
0.88835 |
0.92765 |
0.0393 |
1.04424 | 0.001591 |
UCSC |
1 |
SHISA4 |
201857585 |
201858095 |
0.07046 |
0.10478 |
0.03432 |
1.48715 | 0.009969 |
UCSC |
1 |
FLAD1 |
154955736 |
154956246 |
0.04521 |
0.07571 |
0.0305 |
1.67473 | 0.004112 |
UCSC |
1 |
NPHP4 |
5930928 |
5932274 |
0.93142 |
0.95717 |
0.02575 |
1.02765 | 0.001021 |
UCSC |
1 |
MFSD4 |
205560792 |
205561153 |
0.05423 |
0.07979 |
0.02556 |
1.47125 | 0.000097 |
UCSC |
1 |
KCNN3 |
154842462 |
154843001 |
0.04576 |
0.06989 |
0.02413 |
1.52733 | 0.000157 |
UCSC |
1 |
WDR8 |
3562439 |
3564884 |
0.92132 |
0.94403 |
0.02271 |
1.02465 | 0.000559 |
UCSC |
1 |
SNORD76 |
173837144 |
173837214 |
0.0501 |
0.07277 |
0.02266 |
1.45232 | 0.004951 |
UCSC |
1 |
C1orf151 |
19923426 |
19923550 |
0.0502 |
0.06814 |
0.01794 |
1.35736 | 0.011138 |
UCSC |
1 |
SCCPDH |
246928968 |
246933161 |
0.928 |
0.94445 |
0.01645 |
1.01773 | 0.000134 |
UCSC |
1 |
PRDM16 |
3190758 |
3193428 |
0.63344 |
0.64942 |
0.01598 |
1.02523 | <0.000001 |
UCSC |
1 |
POMGNT1 |
46663795 |
46664910 |
0.04405 |
0.05884 |
0.01479 |
1.33582 | 0.000520 |
UCSC |
1 |
PLCH2 |
2388944 |
2393594 |
0.46381 |
0.47694 |
0.01313 |
1.02831 | 0.000421 |
UCSC |
1 |
ID3 |
23887229 |
23890849 |
0.37701 |
0.3898 |
0.0128 |
1.03394 | 0.004342 |
UCSC |
1 |
H6PD |
9254584 |
9258098 |
0.49484 |
0.50752 |
0.01268 |
1.02563 | 0.034920 |
UCSC |
1 |
DENND4B |
153914372 |
153914534 |
0.97185 |
0.98324 |
0.01138 |
1.01171 | 0.000018 |
UCSC |
1 |
SFRS11 |
70671140 |
70671264 |
0.04733 |
0.05737 |
0.01004 |
1.21212 | 0.000244 |
UCSC |
1 |
LINC00339 |
22347889 |
22351403 |
0.13693 |
0.13288 |
-0.00405 |
0.97042 | 0.000497 |
UCSC |
1 |
S1PR1 |
101774089 |
101776341 |
0.07156 |
0.04623 |
-0.02533 |
0.64597 | 0.044947 |
UCSC |
1 |
DISP1 |
222984294 |
222987808 |
0.92028 |
0.8506 |
-0.06969 |
0.92428 | 0.000530 |
UCSC |
1 |
DNM3 |
172113045 |
172114529 |
0.91143 |
0.82733 |
-0.0841 |
0.90773 | 0.000576 |
UCSC |
1 |
HYI |
43920096 |
43920329 |
0.18046 |
0.09205 |
-0.08842 |
0.51006 | <0.000001 |
UCSC |
1 |
TP73 |
3619332 |
3621934 |
0.72389 |
0.59591 |
-0.12797 |
0.82321 | 0.001898 |
UCSC |
1 |
RNF220 |
44884015 |
44884212 |
0.2364 |
0.10815 |
-0.12825 |
0.45747 | 0.005376 |
UCSC |
1 |
PLCH2 |
2376764 |
2381507 |
0.67195 |
0.54131 |
-0.13063 |
0.80559 | 0.001182 |
UCSC |
1 |
ACTRT2 |
2765690 |
2767761 |
0.86047 |
0.72922 |
-0.13125 |
0.84747 | 0.000560 |
UCSC |
1 |
PRDM16 |
3209058 |
3209980 |
0.89804 |
0.75836 |
-0.13968 |
0.84447 | 0.000382 |
UCSC |
1 |
PSMB2 |
36108141 |
36108290 |
0.52578 |
0.33674 |
-0.18904 |
0.64045 | 0.000085 |
UCSC |
1 |
SKI |
2231912 |
2232608 |
0.88015 |
0.68784 |
-0.19231 |
0.78151 | <0.000001 |
UCSC |
1 |
KIRREL |
157894604 |
157896485 |
0.82443 |
0.62148 |
-0.20295 |
0.75383 | 0.000130 |
UCSC |
1 |
LOC100130417 |
846652 |
850366 |
0.76572 |
0.54975 |
-0.21597 |
0.71796 | 0.000675 |
UCSC |
1 |
COX20 |
244951380 |
244953283 |
0.86095 |
0.64234 |
-0.21862 |
0.74607 | 0.000822 |
UCSC |
1 |
FLJ39609 |
854685 |
854847 |
0.90145 |
0.67584 |
-0.22561 |
0.74973 | 0.000253 |
UCSC |
1 |
KPRP |
152729078 |
152732358 |
0.5928 |
0.35508 |
-0.23772 |
0.59898 | 0.003316 |
UCSC |
1 |
FAM78B |
166037443 |
166041445 |
0.8703 |
0.61577 |
-0.25453 |
0.70754 | 0.000099 |
UCSC |
1 |
LOC100130417 |
833294 |
835245 |
0.88404 |
0.62888 |
-0.25516 |
0.71137 | 0.000085 |
UCSC |
1 |
FAM20B |
178994236 |
178994366 |
0.93604 |
0.67282 |
-0.26321 |
0.7188 | 0.000064 |
UCSC |
1 |
ACTN2 |
236848617 |
236848775 |
0.84674 |
0.57213 |
-0.27461 |
0.67569 | 0.000671 |
UCSC |
1 |
HMGCL |
24152463 |
24152720 |
0.88972 |
0.61058 |
-0.27914 |
0.68626 | 0.000307 |
UCSC |
1 |
PRDM16 |
3318378 |
3320150 |
0.7804 |
0.48434 |
-0.29606 |
0.62063 | 0.000024 |
UCSC |
1 |
PRDM16 |
3051464 |
3052386 |
0.83432 |
0.5334 |
-0.30093 |
0.63932 | 0.000029 |
UCSC |
1 |
APCS |
159556511 |
159560513 |
0.73241 |
0.42207 |
-0.31033 |
0.57628 | 0.000156 |
UCSC |
1 |
CAMTA1 |
7110723 |
7111828 |
0.78619 |
0.457 |
-0.32919 |
0.58128 | 0.000475 |
UCSC |
1 |
TAS1R3 |
1267112 |
1267333 |
0.87446 |
0.54178 |
-0.33268 |
0.61956 | 0.000006 |
UCSC |
1 |
CADM3 |
159169212 |
159174621 |
0.76257 |
0.42954 |
-0.33304 |
0.56328 | <0.000001 |
UCSC |
1 |
ZBTB18 |
244317978 |
244319982 |
0.92882 |
0.57774 |
-0.35108 |
0.62202 | 0.000024 |
UCSC |
1 |
S100A8 |
153362466 |
153363388 |
0.77551 |
0.38982 |
-0.3857 |
0.50266 | 0.000013 |
UCSC |
1 |
CAMTA1 |
7307630 |
7308827 |
0.70873 |
0.30456 |
-0.40418 |
0.42972 | 0.000025 |
UCSC |
1 |
S100A7L2 |
153413755 |
153414056 |
0.71846 |
0.30198 |
-0.41648 |
0.42031 | 0.000016 |
UCSC |
|
|