|
Chr |
Gene |
Start |
End |
Control Avg |
Tumor Avg |
Delta Beta |
Fold |
P Value |
UCSC
|
1 |
C1orf70 |
1475117 |
1475855 |
0.17117 |
0.60395 |
0.43278 |
3.52843 | <0.000001 |
UCSC |
1 |
MIR4666A |
228652418 |
228652744 |
0.29908 |
0.63914 |
0.34006 |
2.13704 | 0.000026 |
UCSC |
1 |
ST6GALNAC5 |
77333154 |
77333242 |
0.19228 |
0.52491 |
0.33263 |
2.72992 | 0.000009 |
UCSC |
1 |
FOXD2 |
47911286 |
47911612 |
0.19765 |
0.51973 |
0.32208 |
2.62956 | <0.000001 |
UCSC |
1 |
DAB1 |
58715482 |
58715603 |
0.19102 |
0.503 |
0.31198 |
2.63324 | 0.000038 |
UCSC |
1 |
PRRX1 |
170630234 |
170630560 |
0.28644 |
0.59818 |
0.31174 |
2.08834 | 0.000008 |
UCSC |
1 |
PLEKHO1 |
150122998 |
150123294 |
0.07896 |
0.37958 |
0.30062 |
4.80731 | 0.000018 |
UCSC |
1 |
ELAVL4 |
50513645 |
50513663 |
0.28063 |
0.56606 |
0.28543 |
2.01711 | 0.000356 |
UCSC |
1 |
RXRG |
165413929 |
165414639 |
0.19427 |
0.47494 |
0.28066 |
2.44468 | <0.000001 |
UCSC |
1 |
NR5A2 |
200004057 |
200004663 |
0.25021 |
0.52881 |
0.2786 |
2.11347 | <0.000001 |
UCSC |
1 |
DMRTA2 |
50886841 |
50887048 |
0.2881 |
0.56324 |
0.27514 |
1.95504 | 0.000012 |
UCSC |
1 |
ESRRG |
217311503 |
217311559 |
0.27806 |
0.55067 |
0.27261 |
1.9804 | <0.000001 |
UCSC |
1 |
PLD5 |
242687409 |
242687645 |
0.19325 |
0.45829 |
0.26504 |
2.37148 | 0.000004 |
UCSC |
1 |
No Gene |
164290668 |
164290996 |
0.23656 |
0.50043 |
0.26386 |
2.1154 | 0.001054 |
UCSC |
1 |
INPP5B |
38412259 |
38412971 |
0.17799 |
0.4345 |
0.2565 |
2.44108 | <0.000001 |
UCSC |
1 |
LOR |
153232386 |
153236388 |
0.29024 |
0.54613 |
0.25589 |
1.88165 | 0.001098 |
UCSC |
1 |
DMBX1 |
46951208 |
46951437 |
0.13822 |
0.39244 |
0.25422 |
2.83934 | 0.000471 |
UCSC |
1 |
ZNF644 |
91300052 |
91300609 |
0.35895 |
0.60498 |
0.24603 |
1.68543 | <0.000001 |
UCSC |
1 |
C1orf173 |
75138662 |
75139616 |
0.28958 |
0.52786 |
0.23828 |
1.82287 | <0.000001 |
UCSC |
1 |
PRDM16 |
3164311 |
3164510 |
0.30962 |
0.54754 |
0.23792 |
1.76843 | 0.000079 |
UCSC |
1 |
AK5 |
77747346 |
77748269 |
0.18456 |
0.41507 |
0.23051 |
2.24896 | <0.000001 |
UCSC |
1 |
WARS2 |
119541996 |
119543378 |
0.29017 |
0.52038 |
0.23021 |
1.79334 | <0.000001 |
UCSC |
1 |
TP73 |
3567691 |
3567766 |
0.44599 |
0.67442 |
0.22843 |
1.5122 | 0.000032 |
UCSC |
1 |
BARHL2 |
91190088 |
91190529 |
0.33826 |
0.55502 |
0.21675 |
1.64079 | 0.000002 |
UCSC |
1 |
FCGR3B |
161590308 |
161592498 |
0.22958 |
0.4447 |
0.21512 |
1.93699 | 0.000164 |
UCSC |
1 |
BARHL2 |
91185074 |
91185316 |
0.39649 |
0.60872 |
0.21223 |
1.53526 | 0.000110 |
UCSC |
1 |
CD34 |
208083882 |
208084219 |
0.45366 |
0.6628 |
0.20914 |
1.461 | 0.000729 |
UCSC |
1 |
RUNX3 |
25257538 |
25257615 |
0.33418 |
0.54153 |
0.20735 |
1.62049 | 0.000086 |
UCSC |
1 |
TBX15 |
119532012 |
119532137 |
0.42454 |
0.62674 |
0.20219 |
1.47626 | 0.000003 |
UCSC |
1 |
MEF2D |
156460044 |
156460734 |
0.17302 |
0.36223 |
0.18921 |
2.09356 | 0.000226 |
UCSC |
1 |
TNFRSF25 |
6525972 |
6526152 |
0.46943 |
0.64636 |
0.17694 |
1.37692 | 0.000175 |
UCSC |
1 |
NTNG1 |
108023287 |
108023662 |
0.42093 |
0.5954 |
0.17448 |
1.41451 | 0.000091 |
UCSC |
1 |
KCNAB2 |
6093945 |
6094465 |
0.57682 |
0.72995 |
0.15313 |
1.26548 | 0.000187 |
UCSC |
1 |
CASZ1 |
10731586 |
10733389 |
0.63957 |
0.79064 |
0.15106 |
1.2362 | <0.000001 |
UCSC |
1 |
LOC728448 |
40024494 |
40025709 |
0.68968 |
0.80298 |
0.1133 |
1.16427 | 0.000037 |
UCSC |
1 |
MIR4426 |
55462111 |
55462437 |
0.13986 |
0.09931 |
-0.04055 |
0.71006 | 0.000442 |
UCSC |
1 |
GSTM4 |
110185922 |
110186127 |
0.23266 |
0.16922 |
-0.06344 |
0.72733 | 0.000906 |
UCSC |
1 |
RHBG |
156339138 |
156339434 |
0.23051 |
0.1607 |
-0.06982 |
0.69712 | 0.000105 |
UCSC |
1 |
HIST3H2BB |
228644853 |
228645027 |
0.22672 |
0.14344 |
-0.08327 |
0.6327 | 0.000504 |
UCSC |
1 |
MST1L |
17051135 |
17051555 |
0.81573 |
0.731 |
-0.08473 |
0.89614 | 0.000177 |
UCSC |
1 |
RHOU |
228872106 |
228872264 |
0.21728 |
0.12878 |
-0.08851 |
0.59266 | 0.000007 |
UCSC |
1 |
CALML6 |
1845887 |
1846160 |
0.7436 |
0.65471 |
-0.08888 |
0.88047 | 0.000052 |
UCSC |
1 |
PRDM16 |
3190742 |
3192701 |
0.85249 |
0.76359 |
-0.0889 |
0.89572 | 0.007938 |
UCSC |
1 |
ZYG11A |
53304499 |
53307987 |
0.82336 |
0.73084 |
-0.09253 |
0.88762 | 0.000028 |
UCSC |
1 |
MIR4417 |
5539051 |
5541042 |
0.83232 |
0.73926 |
-0.09306 |
0.8882 | 0.014913 |
UCSC |
1 |
AJAP1 |
4839939 |
4844530 |
0.89864 |
0.79741 |
-0.10123 |
0.88735 | 0.000002 |
UCSC |
1 |
SLC44A3 |
95285341 |
95285469 |
0.44033 |
0.33871 |
-0.10162 |
0.76922 | 0.000959 |
UCSC |
1 |
MEGF6 |
3495134 |
3496913 |
0.82715 |
0.72543 |
-0.10172 |
0.87702 | 0.021968 |
UCSC |
1 |
IL6R |
154377315 |
154377493 |
0.34111 |
0.2361 |
-0.105 |
0.69217 | 0.000043 |
UCSC |
1 |
FAM20B |
178994237 |
178994365 |
0.93919 |
0.83387 |
-0.10532 |
0.88786 | 0.000101 |
UCSC |
1 |
DUSP27 |
167090946 |
167091242 |
0.36869 |
0.2612 |
-0.10749 |
0.70846 | 0.001927 |
UCSC |
1 |
ACTRT2 |
2819263 |
2821982 |
0.83534 |
0.72478 |
-0.11056 |
0.86765 | 0.000013 |
UCSC |
1 |
PIK3CD |
9779920 |
9781383 |
0.86148 |
0.74911 |
-0.11237 |
0.86956 | <0.000001 |
UCSC |
1 |
LAMC2 |
183155096 |
183156121 |
0.3156 |
0.2028 |
-0.1128 |
0.6426 | 0.000001 |
UCSC |
1 |
LCE2B |
152657753 |
152661755 |
0.7162 |
0.60327 |
-0.11293 |
0.84232 | 0.005404 |
UCSC |
1 |
C1orf170 |
915977 |
918135 |
0.63272 |
0.51941 |
-0.1133 |
0.82093 | 0.000002 |
UCSC |
1 |
ACTRT2 |
2828115 |
2828281 |
0.87396 |
0.75916 |
-0.1148 |
0.86865 | 0.000173 |
UCSC |
1 |
PLCH2 |
2378006 |
2381494 |
0.66719 |
0.54689 |
-0.12029 |
0.8197 | 0.000415 |
UCSC |
1 |
ACTRT2 |
2934533 |
2938055 |
0.79015 |
0.66866 |
-0.12149 |
0.84625 | 0.000220 |
UCSC |
1 |
BGLAP |
156211337 |
156211531 |
0.71049 |
0.58791 |
-0.12258 |
0.82748 | 0.000172 |
UCSC |
1 |
SLC25A33 |
9598962 |
9599090 |
0.73272 |
0.60997 |
-0.12275 |
0.83248 | 0.000199 |
UCSC |
1 |
CHD1L |
146713895 |
146714023 |
0.43233 |
0.30692 |
-0.12542 |
0.70991 | 0.000130 |
UCSC |
1 |
C1QC |
22968712 |
22971966 |
0.60922 |
0.48149 |
-0.12773 |
0.79034 | 0.000182 |
UCSC |
1 |
ZBTB8B |
32888509 |
32891997 |
0.74291 |
0.60964 |
-0.13327 |
0.82061 | 0.000049 |
UCSC |
1 |
KLF17 |
44584403 |
44584455 |
0.87498 |
0.74142 |
-0.13356 |
0.84736 | 0.000203 |
UCSC |
1 |
PRDM16 |
3271846 |
3273618 |
0.7499 |
0.61607 |
-0.13383 |
0.82153 | 0.000050 |
UCSC |
1 |
ACTRT2 |
2795286 |
2797598 |
0.73307 |
0.59816 |
-0.13491 |
0.81597 | 0.000011 |
UCSC |
1 |
KIRREL |
157894320 |
157897307 |
0.81302 |
0.67576 |
-0.13726 |
0.83117 | <0.000001 |
UCSC |
1 |
ACTRT2 |
2838952 |
2841147 |
0.7462 |
0.60822 |
-0.13798 |
0.81509 | 0.000007 |
UCSC |
1 |
RER1 |
2361864 |
2365352 |
0.77962 |
0.63798 |
-0.14163 |
0.81833 | 0.000085 |
UCSC |
1 |
ACTRT2 |
2946115 |
2948698 |
0.74441 |
0.60256 |
-0.14185 |
0.80944 | <0.000001 |
UCSC |
1 |
HES4 |
939638 |
947843 |
0.79434 |
0.65122 |
-0.14312 |
0.81983 | 0.000001 |
UCSC |
1 |
AMPD1 |
115238343 |
115238673 |
0.83525 |
0.69163 |
-0.14362 |
0.82806 | 0.000321 |
UCSC |
1 |
PRDM16 |
3206533 |
3210901 |
0.85208 |
0.70078 |
-0.1513 |
0.82243 | 0.000028 |
UCSC |
1 |
ACTRT2 |
2953201 |
2955336 |
0.66642 |
0.51101 |
-0.15541 |
0.76679 | 0.000008 |
UCSC |
1 |
RRAGC |
39035027 |
39036937 |
0.58855 |
0.43139 |
-0.15716 |
0.73297 | 0.000260 |
UCSC |
1 |
RER1 |
2359885 |
2360101 |
0.80333 |
0.64404 |
-0.1593 |
0.80171 | 0.000011 |
UCSC |
1 |
CACNA1E |
181382771 |
181383097 |
0.81254 |
0.65304 |
-0.1595 |
0.8037 | 0.000003 |
UCSC |
1 |
MIR4689 |
5895143 |
5897560 |
0.70542 |
0.54371 |
-0.16171 |
0.77076 | <0.000001 |
UCSC |
1 |
CHIT1 |
203192040 |
203193197 |
0.83528 |
0.67052 |
-0.16476 |
0.80275 | 0.000245 |
UCSC |
1 |
MIR4689 |
5811106 |
5813799 |
0.69587 |
0.53033 |
-0.16554 |
0.76211 | 0.000003 |
UCSC |
1 |
TTC34 |
2749499 |
2752124 |
0.81496 |
0.64794 |
-0.16702 |
0.79505 | 0.000003 |
UCSC |
1 |
LELP1 |
153175576 |
153179578 |
0.78188 |
0.61164 |
-0.17024 |
0.78227 | 0.000153 |
UCSC |
1 |
ZBTB40 |
22777655 |
22777783 |
0.90228 |
0.7307 |
-0.17158 |
0.80983 | 0.000007 |
UCSC |
1 |
LOC100130417 |
832648 |
835263 |
0.76405 |
0.59238 |
-0.17166 |
0.77532 | <0.000001 |
UCSC |
1 |
SLC26A9 |
205896682 |
205898022 |
0.80151 |
0.62969 |
-0.17182 |
0.78563 | 0.015041 |
UCSC |
1 |
S100A9 |
153330139 |
153330659 |
0.42237 |
0.2504 |
-0.17198 |
0.59284 | 0.001079 |
UCSC |
1 |
CADM3 |
159170619 |
159174621 |
0.65744 |
0.48182 |
-0.17563 |
0.73287 | 0.000003 |
UCSC |
1 |
FLJ39609 |
854687 |
854845 |
0.88408 |
0.70841 |
-0.17567 |
0.8013 | 0.000009 |
UCSC |
1 |
APCS |
159556511 |
159560513 |
0.75745 |
0.58149 |
-0.17596 |
0.76769 | 0.000042 |
UCSC |
1 |
ZNF648 |
182027049 |
182030303 |
0.80992 |
0.63016 |
-0.17976 |
0.77806 | <0.000001 |
UCSC |
1 |
SSBP3 |
54821762 |
54822058 |
0.52509 |
0.34462 |
-0.18047 |
0.65631 | 0.000131 |
UCSC |
1 |
PLCH2 |
2427603 |
2429482 |
0.81264 |
0.63062 |
-0.18202 |
0.77602 | <0.000001 |
UCSC |
1 |
AKR7A2P1 |
113393133 |
113396621 |
0.87458 |
0.6913 |
-0.18328 |
0.79044 | <0.000001 |
UCSC |
1 |
BTG2 |
203270101 |
203273589 |
0.82107 |
0.63653 |
-0.18454 |
0.77525 | 0.000010 |
UCSC |
1 |
BEND5 |
49224348 |
49225372 |
0.91282 |
0.72755 |
-0.18528 |
0.79703 | <0.000001 |
UCSC |
1 |
C1orf110 |
162838695 |
162838923 |
0.77296 |
0.58318 |
-0.18978 |
0.75448 | 0.000003 |
UCSC |
1 |
F3 |
95006303 |
95006599 |
0.63422 |
0.44349 |
-0.19073 |
0.69926 | 0.000023 |
UCSC |
1 |
S100A7L2 |
153413757 |
153414054 |
0.69582 |
0.50382 |
-0.19201 |
0.72406 | 0.000007 |
UCSC |
1 |
LCE3E |
152536379 |
152540381 |
0.66186 |
0.46907 |
-0.19279 |
0.70872 | <0.000001 |
UCSC |
1 |
C1orf228 |
45186744 |
45188516 |
0.5641 |
0.3694 |
-0.1947 |
0.65485 | 0.000338 |
UCSC |
1 |
S100A16 |
153581234 |
153582010 |
0.59701 |
0.40062 |
-0.19639 |
0.67104 | 0.000083 |
UCSC |
1 |
NGF |
115829596 |
115830116 |
0.8698 |
0.67277 |
-0.19703 |
0.77348 | 0.000001 |
UCSC |
1 |
LOC642587 |
209603901 |
209605060 |
0.87263 |
0.6746 |
-0.19803 |
0.77307 | <0.000001 |
UCSC |
1 |
SPRR1A |
152956101 |
152960103 |
0.79683 |
0.59375 |
-0.20308 |
0.74514 | 0.000008 |
UCSC |
1 |
S100A8 |
153362450 |
153363404 |
0.59807 |
0.39484 |
-0.20323 |
0.66019 | 0.000118 |
UCSC |
1 |
PRMT6 |
106624597 |
106628449 |
0.75281 |
0.54804 |
-0.20476 |
0.728 | 0.000009 |
UCSC |
1 |
LINC01132 |
234907319 |
234909421 |
0.46056 |
0.2547 |
-0.20586 |
0.55302 | 0.000223 |
UCSC |
1 |
LCE1F |
152747358 |
152747676 |
0.65801 |
0.45073 |
-0.20727 |
0.685 | 0.000001 |
UCSC |
1 |
UBXN11 |
26610834 |
26611930 |
0.39467 |
0.1858 |
-0.20888 |
0.47076 | 0.000005 |
UCSC |
1 |
CD1B |
158300561 |
158301515 |
0.81913 |
0.60675 |
-0.21238 |
0.74072 | <0.000001 |
UCSC |
1 |
PAPPA2 |
176809644 |
176813646 |
0.79651 |
0.58379 |
-0.21272 |
0.73294 | 0.000005 |
UCSC |
1 |
TAS1R3 |
1267114 |
1267331 |
0.84269 |
0.62994 |
-0.21275 |
0.74754 | <0.000001 |
UCSC |
1 |
SLAMF7 |
160708762 |
160709716 |
0.72711 |
0.51045 |
-0.21666 |
0.70203 | <0.000001 |
UCSC |
1 |
PRDM16 |
3353606 |
3355273 |
0.87879 |
0.66158 |
-0.21722 |
0.75283 | 0.000001 |
UCSC |
1 |
C1orf106 |
200862596 |
200865850 |
0.76396 |
0.54649 |
-0.21747 |
0.71534 | <0.000001 |
UCSC |
1 |
LCE2A |
152669706 |
152673708 |
0.61477 |
0.38596 |
-0.22882 |
0.6278 | <0.000001 |
UCSC |
1 |
ACOT7 |
6333025 |
6334344 |
0.85292 |
0.61497 |
-0.23795 |
0.72102 | <0.000001 |
UCSC |
1 |
TNNT2 |
201347365 |
201347664 |
0.7634 |
0.52474 |
-0.23866 |
0.68738 | 0.000201 |
UCSC |
1 |
PER3 |
7842206 |
7842569 |
0.542 |
0.27746 |
-0.26454 |
0.51193 | 0.000205 |
UCSC |
|
|