MethCNA: a database for integrating genomic and epigenomic data in cancer
 
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  DMRs of TCGA_THCA  
 
Chromosome:  
  There are totally 18 DMRs found in chromosome 1.
Note: For small series(<30 samples), M-values are transformed into beta-values.Download table		  
 
Chr Gene Start End Control Avg Tumor Avg Delta Beta Fold P Value UCSC
1 TP73 3600271 3601343 0.55147 0.70791 0.15644 1.28368 <0.000001 UCSC
1 CATSPER4 26527406 26528392 0.49402 0.59563 0.10162 1.20569 <0.000001 UCSC
1 SPSB1 9400434 9401033 0.81972 0.87313 0.05341 1.06516 <0.000001 UCSC
1 TFAP2E 36042905 36043095 0.07145 0.11712 0.04567 1.63917 0.000004 UCSC
1 SLC30A10 220101651 220101775 0.04674 0.06762 0.02088 1.44666 0.000011 UCSC
1 PHC2 33816044 33816132 0.0264 0.03167 0.00526 1.19939 0.000005 UCSC
1 GJB3 35247006 35247131 0.03813 0.03282 -0.0053 0.86091 <0.000001 UCSC
1 C1orf183 112297703 112298007 0.05947 0.05379 -0.00568 0.9045 0.000037 UCSC
1 PLEKHG5 6546525 6546853 0.0436 0.03508 -0.00852 0.80459 <0.000001 UCSC
1 MIR3671 65468753 65469089 0.06446 0.05385 -0.01061 0.83545 0.000030 UCSC
1 ROR1 64239334 64239468 0.06294 0.05134 -0.0116 0.81566 <0.000001 UCSC
1 PLOD1 11994318 11994511 0.05309 0.04111 -0.01198 0.7743 <0.000001 UCSC
1 STIL 47779540 47779788 0.061 0.04811 -0.01289 0.78872 <0.000001 UCSC
1 ZNF672 249131849 249132024 0.05163 0.03615 -0.01548 0.70015 <0.000001 UCSC
1 C1orf103 111506513 111506607 0.06848 0.05211 -0.01637 0.76098 <0.000001 UCSC
1 RER1 2359933 2360103 0.89265 0.87552 -0.01712 0.98082 0.000029 UCSC
1 TDRD10 154474518 154474538 0.07311 0.04775 -0.02536 0.65315 <0.000001 UCSC
1 SKI 2230449 2230820 0.56683 0.50326 -0.06358 0.88784 <0.000001 UCSC
 
 
© 2017 Cai Laboratory.  Last updated on 30 December 2017