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  DMRs of TCGA_UCS  
 
Chromosome:  
  There are totally 111 DMRs found in chromosome 1.
Note: For small series(<30 samples), M-values are transformed into beta-values.Download table		  
 
Chr Gene Start End Control Avg Tumor Avg Delta Beta Fold P Value UCSC
1 MIR5087 147782390 147782726 0.19528 0.80838 0.61311 4.13969 <0.000001 UCSC
1 ELAVL4 50513645 50513663 0.09837 0.62972 0.53135 6.40133 <0.000001 UCSC
1 WARS2 119535896 119536232 0.15172 0.65012 0.4984 4.28496 <0.000001 UCSC
1 TFAP2E 36042905 36043095 0.28606 0.77231 0.48624 2.69979 <0.000001 UCSC
1 ELTD1 79472201 79472459 0.31967 0.78893 0.46926 2.46794 <0.000001 UCSC
1 HLX 221057477 221057654 0.45199 0.90202 0.45003 1.99567 <0.000001 UCSC
1 SDCCAG8 243646165 243646476 0.17047 0.6179 0.44743 3.62471 <0.000001 UCSC
1 PROX1 214153292 214153545 0.20836 0.64129 0.43293 3.07782 <0.000001 UCSC
1 TCTEX1D1 67217759 67217953 0.32588 0.75305 0.42717 2.3108 <0.000001 UCSC
1 PDIA3P 146649689 146649932 0.35068 0.77726 0.42659 2.21646 <0.000001 UCSC
1 C2CD4D 151810806 151810985 0.31999 0.72681 0.40683 2.27139 <0.000001 UCSC
1 ESRRG 217311502 217312060 0.20222 0.60226 0.40004 2.97822 <0.000001 UCSC
1 RUNX3 25257537 25258265 0.24198 0.6415 0.39952 2.65105 <0.000001 UCSC
1 TNFSF4 173176110 173176618 0.19803 0.58878 0.39075 2.97315 <0.000001 UCSC
1 WARS2 119543210 119543380 0.15107 0.54176 0.3907 3.58624 0.000063 UCSC
1 TAL1 47695287 47695529 0.26693 0.64789 0.38097 2.42723 <0.000001 UCSC
1 DEGS1 224362535 224364489 0.16988 0.55042 0.38055 3.24016 <0.000001 UCSC
1 OR2L13 248100540 248100659 0.16199 0.53527 0.37328 3.30439 0.000037 UCSC
1 CATSPER4 26527439 26528359 0.17131 0.52998 0.35867 3.09368 0.000793 UCSC
1 LOC388692 149155607 149156017 0.22879 0.58528 0.3565 2.5582 <0.000001 UCSC
1 GSTM5 110254544 110255002 0.42625 0.78272 0.35647 1.8363 <0.000001 UCSC
1 MIR4666A 228657459 228657795 0.17792 0.52652 0.3486 2.95925 0.000002 UCSC
1 RUNX3 25253935 25254302 0.55701 0.89015 0.33314 1.59808 <0.000001 UCSC
1 HLX 221055638 221055800 0.45493 0.78662 0.3317 1.72911 <0.000001 UCSC
1 ESPN 6515499 6515705 0.37041 0.70094 0.33054 1.89237 <0.000001 UCSC
1 ZNF496 247510450 247512383 0.29931 0.62568 0.32637 2.09039 0.000301 UCSC
1 COL9A2 40769588 40769825 0.55757 0.87381 0.31624 1.56717 <0.000001 UCSC
1 DMBX1 46957578 46961120 0.30839 0.61845 0.31006 2.00541 <0.000001 UCSC
1 MIR5087 147718871 147719207 0.39441 0.69422 0.29981 1.76014 <0.000001 UCSC
1 MYCL 40387309 40389309 0.47914 0.76936 0.29022 1.60571 0.035934 UCSC
1 S100A16 153581283 153582045 0.3787 0.64604 0.26734 1.70594 0.000003 UCSC
1 LINC00210 218097508 218099507 0.36902 0.62512 0.2561 1.694 0.000206 UCSC
1 C1orf177 55271821 55272008 0.64006 0.86038 0.22032 1.34422 <0.000001 UCSC
1 VWA1 1376838 1378756 0.5748 0.75599 0.18119 1.31522 0.032469 UCSC
1 MIR5087 147800111 147804750 0.60761 0.78761 0.18001 1.29625 <0.000001 UCSC
1 SKI 2205339 2206333 0.64963 0.79635 0.14672 1.22585 <0.000001 UCSC
1 RERE 8410696 8414760 0.61605 0.75518 0.13913 1.22585 0.000085 UCSC
1 VSIG8 159825399 159825781 0.78032 0.9035 0.12318 1.15786 <0.000001 UCSC
1 ESRRG 217306579 217306821 0.83836 0.92899 0.09063 1.1081 0.000035 UCSC
1 FAM71A 212818679 212821108 0.74088 0.82174 0.08086 1.10914 <0.000001 UCSC
1 PSMD4 151226973 151227485 0.0485 0.04339 -0.00511 0.89469 0.000681 UCSC
1 MPZL1 167691245 167691335 0.07805 0.05783 -0.02022 0.74089 0.000035 UCSC
1 RBBP5 205090837 205091341 0.05786 0.03729 -0.02056 0.6446 0.000012 UCSC
1 GAS5 173836574 173836977 0.06115 0.03688 -0.02427 0.60316 0.000003 UCSC
1 ANP32E 150208604 150208640 0.05397 0.02807 -0.0259 0.52006 <0.000001 UCSC
1 SYT14 210110931 210111095 0.06228 0.02921 -0.03307 0.46902 0.000002 UCSC
1 SLC30A10 220101653 220101773 0.05897 0.02492 -0.03404 0.42267 <0.000001 UCSC
1 GFI1 92950035 92950316 0.0796 0.04184 -0.03776 0.52566 <0.000001 UCSC
1 KCNJ10 160039841 160039977 0.08403 0.03945 -0.04459 0.46942 0.000032 UCSC
1 SUSD4 223538330 223538388 0.08952 0.04365 -0.04587 0.4876 <0.000001 UCSC
1 PLEKHO1 150122993 150123299 0.0759 0.01953 -0.05637 0.25736 <0.000001 UCSC
1 BMP8A 39957342 39957445 0.12891 0.06132 -0.06759 0.47566 <0.000001 UCSC
1 AK5 77747345 77747416 0.13535 0.05598 -0.07937 0.41358 <0.000001 UCSC
1 OLFM3 102462430 102462934 0.22367 0.12496 -0.09871 0.55868 0.000496 UCSC
1 MIXL1 226411004 226412107 0.23111 0.12694 -0.10416 0.54929 <0.000001 UCSC
1 KIAA1751 1875718 1875888 0.24092 0.13025 -0.11067 0.54063 0.000387 UCSC
1 HOOK1 60280787 60280949 0.19514 0.08247 -0.11267 0.42264 <0.000001 UCSC
1 FOXD2 47973398 47973879 0.19929 0.07286 -0.12642 0.36561 <0.000001 UCSC
1 KIAA1026 15392002 15392864 0.87491 0.74546 -0.12945 0.85204 0.000134 UCSC
1 KIAA1804 233462644 233462832 0.26571 0.13506 -0.13065 0.5083 <0.000001 UCSC
1 RCC2 17766288 17769830 0.38649 0.24762 -0.13887 0.64069 0.000324 UCSC
1 RNF220 44884015 44884231 0.2154 0.05429 -0.16111 0.25207 <0.000001 UCSC
1 TMEM52 1851349 1851506 0.67819 0.49877 -0.17942 0.73545 0.000051 UCSC
1 CHD1L 146713892 146714086 0.39177 0.20396 -0.18781 0.52062 <0.000001 UCSC
1 TLR5 223316201 223316303 0.36801 0.17362 -0.19438 0.47179 <0.000001 UCSC
1 PLCH2 2388930 2393608 0.64775 0.42805 -0.21969 0.66083 0.000006 UCSC
1 SORT1 109940976 109941185 0.38584 0.16327 -0.22256 0.42317 <0.000001 UCSC
1 IL12RB2 67772952 67773194 0.40803 0.17454 -0.23349 0.42776 <0.000001 UCSC
1 LOC100133612 3825792 3827932 0.4749 0.23939 -0.2355 0.50409 0.001954 UCSC
1 LGTN 206786103 206786289 0.49146 0.25422 -0.23725 0.51726 <0.000001 UCSC
1 ATF3 212688748 212689165 0.71831 0.47155 -0.24676 0.65647 0.002719 UCSC
1 ISG15 941557 943978 0.85083 0.60104 -0.24979 0.70642 0.000010 UCSC
1 LOC653160 35389998 35394079 0.63639 0.38117 -0.25522 0.59896 0.000060 UCSC
1 ST6GALNAC5 77229705 77231751 0.3953 0.1395 -0.2558 0.35289 <0.000001 UCSC
1 RER1 2364150 2366677 0.50684 0.25078 -0.25606 0.49479 0.000021 UCSC
1 C1orf86 2124961 2125339 0.78236 0.52355 -0.25881 0.6692 <0.000001 UCSC
1 PRDM16 3099408 3101348 0.80323 0.54033 -0.2629 0.6727 0.000107 UCSC
1 ELF3 201979360 201979596 0.61015 0.34477 -0.26537 0.56507 0.000001 UCSC
1 ACTRT2 2837891 2840161 0.72723 0.46141 -0.26582 0.63447 <0.000001 UCSC
1 CADM3 159170619 159174621 0.70196 0.4246 -0.27736 0.60488 0.000029 UCSC
1 OBSCN 228559002 228559237 0.7551 0.47742 -0.27767 0.63227 0.000002 UCSC
1 CD58 117112463 117113007 0.55282 0.26618 -0.28665 0.48149 <0.000001 UCSC
1 DHDDS 26797386 26797809 0.45902 0.17236 -0.28666 0.3755 <0.000001 UCSC
1 HEYL 40105635 40105716 0.5004 0.21272 -0.28768 0.4251 <0.000001 UCSC
1 CRP 159680496 159684498 0.89197 0.59671 -0.29526 0.66898 0.000023 UCSC
1 PRDM16 3143114 3145060 0.77996 0.46429 -0.31568 0.59527 0.000002 UCSC
1 No Gene 4086268 4088140 0.63602 0.31955 -0.31646 0.50243 0.000021 UCSC
1 PRDM16 3209479 3210855 0.84957 0.52948 -0.32009 0.62323 0.000025 UCSC
1 ICMT 6294615 6294921 0.69776 0.35953 -0.33823 0.51526 <0.000001 UCSC
1 ODF2L 86861026 86861353 0.58683 0.24596 -0.34087 0.41914 <0.000001 UCSC
1 OR2B11 247616390 247619932 0.72374 0.38256 -0.34118 0.52859 0.000438 UCSC
1 GABRD 1945094 1947269 0.64895 0.3024 -0.34656 0.46597 0.000014 UCSC
1 S100A8 153362496 153363358 0.76259 0.41536 -0.34723 0.54467 0.000010 UCSC
1 SLC45A1 8271750 8272086 0.74038 0.35984 -0.38054 0.48602 0.000002 UCSC
1 PLCH2 2425429 2426466 0.81512 0.42902 -0.38611 0.52632 <0.000001 UCSC
1 PSMB2 36108139 36108292 0.60596 0.21086 -0.39509 0.34798 <0.000001 UCSC
1 MIR4689 5778249 5780297 0.74618 0.3452 -0.40098 0.46263 0.000001 UCSC
1 CTNNBIP1 9886040 9889755 0.86701 0.46549 -0.40152 0.53689 <0.000001 UCSC
1 CAMTA1 7110753 7111798 0.77465 0.36951 -0.40514 0.47701 <0.000001 UCSC
1 MIR4417 5539044 5541864 0.89082 0.4854 -0.40542 0.54489 <0.000001 UCSC
1 AJAP1 4735668 4736618 0.8106 0.40466 -0.40595 0.4992 0.000025 UCSC
1 No Gene 4221316 4221486 0.77961 0.36651 -0.41309 0.47012 <0.000001 UCSC
1 MIR3671 65467812 65468185 0.88415 0.45681 -0.42734 0.51667 <0.000001 UCSC
1 APCS 159556511 159560513 0.81528 0.38093 -0.43435 0.46723 <0.000001 UCSC
1 FAM78B 166037443 166041445 0.88565 0.4397 -0.44595 0.49647 <0.000001 UCSC
1 PRDM16 3276260 3278474 0.90172 0.45407 -0.44764 0.50357 <0.000001 UCSC
1 F3 95006298 95006604 0.72137 0.26097 -0.4604 0.36177 <0.000001 UCSC
1 TAS1R3 1267112 1267333 0.80521 0.33255 -0.47266 0.41299 <0.000001 UCSC
1 CNST 246728596 246728794 0.72065 0.22908 -0.49158 0.31787 <0.000001 UCSC
1 S100A7L2 153413753 153414058 0.69243 0.19419 -0.49824 0.28045 <0.000001 UCSC
1 CD1B 158300607 158301469 0.9071 0.3717 -0.5354 0.40977 0.000001 UCSC
 
 
© 2017 Cai Laboratory.  Last updated on 30 December 2017