Gene Expression Files:

We collected and uniformly processed 21 gene expression datasets for ESCC from GEO and UCSC xena database which was derived from TCGA databases.

We here provide normalized expression data and called DEGs (|log2(Fold change)| >= 1 and adjusted p value < 0.05) for each dataset. Download now. (94.74 MB)

miRNA Expression Files:

We collected and uniformly processed 9 gene expression datasets for ESCC from GEO and UCSC xena database which was derived from TCGA databases.

We here provide normalized expression data for each dataset. Download now. (5.15 MB)

Copy Number Change Files:

We collected and uniformly processed 10 CNV datasets for ESCC from GEO database and an additional dataset from UCSC xena database which was derived from TCGA.

We here provide GISTICS results at gene level for each dataset, including both threshold and ratio data. Download now. (5.31 MB)

Mutation Data Files:

We collected and uniformly annotated SNV and indel mutations from 12 ESCC related high-throughput sequencing papers.

We here provide annovar annotation results each paper's mutations. Download now. (92.26 MB)

TF Binding on Genes:

We collected the transcription factor binding site data from GTRD database and represented it as a table.

The rows correspond to genes, while the colunms correspond to TFs. It may be used to do TFBS enrichment analysis. Download now. (5.90 MB)