ZSCAN23

 

Full name: zinc finger and SCAN domain containing 23 Alias Symbol: dJ29K1.3.1
Type: protein-coding gene Cytoband: 6p22.1
Entrez ID: 222696 HGNC ID: HGNC:21193 Ensembl Gene: ENSG00000187987 OMIM ID: 

 

Expression of ZSCAN23:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZSCAN23 222696 1564039_at 0.0094 0.9816
GSE26886 ZSCAN23 222696 1564039_at 0.0365 0.7183
GSE45670 ZSCAN23 222696 1564039_at 0.1870 0.3312
GSE53622 ZSCAN23 222696 132551 -0.1914 0.3566
GSE53624 ZSCAN23 222696 132551 0.1450 0.3457
GSE63941 ZSCAN23 222696 1564039_at -0.2313 0.3344
GSE77861 ZSCAN23 222696 1564039_at -0.0390 0.7693
SRP133303 ZSCAN23 222696 RNAseq 0.0117 0.9672
TCGA ZSCAN23 222696 RNAseq -0.2322 0.5390

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by ZSCAN23 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of ZSCAN23:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZSCAN23 222696 3 2 25
GSE20123 ZSCAN23 222696 3 2 25
GSE43470 ZSCAN23 222696 5 0 38
GSE46452 ZSCAN23 222696 1 10 48
GSE47630 ZSCAN23 222696 7 4 29
GSE54993 ZSCAN23 222696 2 1 67
GSE54994 ZSCAN23 222696 11 4 38
GSE60625 ZSCAN23 222696 0 1 10
GSE74703 ZSCAN23 222696 5 0 31
GSE74704 ZSCAN23 222696 0 1 19
TCGA ZSCAN23 222696 15 19 62

Total number of gains: 52; Total number of losses: 44; Total Number of normals: 392.  

 

Somatic mutations of ZSCAN23:

 

Generating mutation plots.

 

Highly correlated genes for ZSCAN23:

 

Showing all 1 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZSCAN23AS3MT0.607671303

For details and further investigation, click here