C5orf38

 

Full name: chromosome 5 open reading frame 38 Alias Symbol: CEI|IRX2NB
Type: protein-coding gene Cytoband: 5p15.33
Entrez ID: 153571 HGNC ID: HGNC:24226 Ensembl Gene: ENSG00000186493 OMIM ID: 610522
Drug and gene relationship at DGIdb

 

Expression of C5orf38:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE53622 C5orf38 153571 90337 0.3115 0.0034
GSE53624 C5orf38 153571 90337 0.2381 0.0194
GSE97050 C5orf38 153571 A_23_P331235 0.3833 0.2874
SRP064894 C5orf38 153571 RNAseq -0.0320 0.9656
SRP133303 C5orf38 153571 RNAseq 0.6755 0.1094
SRP159526 C5orf38 153571 RNAseq 1.2126 0.0021
SRP219564 C5orf38 153571 RNAseq 2.6966 0.0064
TCGA C5orf38 153571 RNAseq 0.2011 0.3909

Upregulated datasets: 2; Downregulated datasets: 0.  

 

Survival by C5orf38 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of C5orf38:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 C5orf38 153571 12 1 17
GSE20123 C5orf38 153571 12 1 17
GSE43470 C5orf38 153571 16 1 26
GSE46452 C5orf38 153571 6 22 31
GSE47630 C5orf38 153571 6 11 23
GSE54993 C5orf38 153571 5 5 60
GSE54994 C5orf38 153571 29 1 23
GSE60625 C5orf38 153571 0 0 11
GSE74703 C5orf38 153571 13 0 23
GSE74704 C5orf38 153571 11 0 9
TCGA C5orf38 153571 56 4 36

Total number of gains: 166; Total number of losses: 46; Total Number of normals: 276.  

 

Somatic mutations of C5orf38:

 

Generating mutation plots.

 

Highly correlated genes for C5orf38:

 

Showing all 1 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
C5orf38HOXB90.696552303

For details and further investigation, click here