HOXB9

 

Full name: homeobox B9 Alias Symbol: 
Type: protein-coding gene Cytoband: 17q21.32
Entrez ID: 3219 HGNC ID: HGNC:5120 Ensembl Gene: ENSG00000170689 OMIM ID: 142964
Drug and gene relationship at DGIdb

 

Expression of HOXB9:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 HOXB9 3219 226461_at 0.1120 0.5948
GSE20347 HOXB9 3219 216417_x_at 0.1251 0.0772
GSE23400 HOXB9 3219 216417_x_at -0.0142 0.5366
GSE26886 HOXB9 3219 226461_at 0.3686 0.0290
GSE29001 HOXB9 3219 216417_x_at 0.1945 0.0788
GSE38129 HOXB9 3219 216417_x_at 0.2242 0.0007
GSE45670 HOXB9 3219 216417_x_at 0.1759 0.0220
GSE53622 HOXB9 3219 55716 0.5376 0.0000
GSE53624 HOXB9 3219 55716 0.7711 0.0000
GSE63941 HOXB9 3219 226461_at 1.3825 0.0474
GSE77861 HOXB9 3219 226461_at -0.1192 0.3140
GSE97050 HOXB9 3219 A_23_P27013 0.4848 0.2591
SRP159526 HOXB9 3219 RNAseq 4.9791 0.0000
TCGA HOXB9 3219 RNAseq 2.1982 0.0000

Upregulated datasets: 3; Downregulated datasets: 0.  


 

Survival by HOXB9 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of HOXB9:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 HOXB9 3219 5 2 23
GSE20123 HOXB9 3219 5 2 23
GSE43470 HOXB9 3219 3 1 39
GSE46452 HOXB9 3219 32 0 27
GSE47630 HOXB9 3219 9 0 31
GSE54993 HOXB9 3219 2 4 64
GSE54994 HOXB9 3219 10 6 37
GSE60625 HOXB9 3219 4 0 7
GSE74703 HOXB9 3219 3 1 32
GSE74704 HOXB9 3219 4 1 15
TCGA HOXB9 3219 27 6 63

Total number of gains: 104; Total number of losses: 23; Total Number of normals: 361.  


 

Somatic mutations of HOXB9:

 

Generating mutation plots.

 

Highly correlated genes for HOXB9:

 

Showing top 20/316 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
HOXB9MOGAT30.763539404
HOXB9OSBPL50.759763303
HOXB9JSRP10.755123303
HOXB9NTNG20.753541303
HOXB9HDAC100.745749404
HOXB9VMO10.743165303
HOXB9MGAT5B0.733405303
HOXB9DUSP150.71558303
HOXB9KIRREL20.707082303
HOXB9RGP10.705634303
HOXB9FMR1NB0.701949303
HOXB9DEFB108B0.700965303
HOXB9RIN10.698699404
HOXB9C10orf900.698305303
HOXB9PLD40.697752303
HOXB9C5orf380.696552303
HOXB9ODF3L10.689115303
HOXB9MAPK150.682418404
HOXB9LRRC460.680504303
HOXB9FUT70.679624403

For details and further investigation, click here