CCSER1

 

Full name: coiled-coil serine rich protein 1 Alias Symbol: KIAA1680
Type: protein-coding gene Cytoband: 4q22.1
Entrez ID: 401145 HGNC ID: HGNC:29349 Ensembl Gene: ENSG00000184305 OMIM ID: 

 

Expression of CCSER1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CCSER1 401145 232738_at -0.0061 0.9874
GSE26886 CCSER1 401145 232738_at 0.1517 0.4588
GSE45670 CCSER1 401145 232738_at -0.0629 0.4291
GSE53622 CCSER1 401145 144928 -0.1698 0.3064
GSE53624 CCSER1 401145 144928 -0.2074 0.0755
GSE63941 CCSER1 401145 232738_at 0.1189 0.6061
GSE77861 CCSER1 401145 232738_at -0.0892 0.2895
SRP007169 CCSER1 401145 RNAseq 1.7634 0.0407
SRP133303 CCSER1 401145 RNAseq -0.7115 0.0748
SRP159526 CCSER1 401145 RNAseq 2.0087 0.0004
SRP193095 CCSER1 401145 RNAseq 0.2945 0.3874

Upregulated datasets: 2; Downregulated datasets: 0.  

 

Survival by CCSER1 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of CCSER1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CCSER1 401145 0 13 17
GSE20123 CCSER1 401145 0 13 17
GSE43470 CCSER1 401145 0 17 26
GSE46452 CCSER1 401145 1 36 22
GSE47630 CCSER1 401145 0 20 20
GSE54993 CCSER1 401145 8 0 62
GSE54994 CCSER1 401145 2 13 38
GSE60625 CCSER1 401145 3 0 8
GSE74703 CCSER1 401145 0 15 21
GSE74704 CCSER1 401145 0 8 12
TCGA CCSER1 401145 12 46 38

Total number of gains: 26; Total number of losses: 181; Total Number of normals: 281.  

 

Somatic mutations of CCSER1:

 

Generating mutation plots.

 

Highly correlated genes for CCSER1:

 

Showing all 3 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CCSER1GPR630.573555303
CCSER1TTLL90.568358303
CCSER1SSR40.56388303

For details and further investigation, click here