CLEC3A

 

Full name: C-type lectin domain family 3 member A Alias Symbol: 
Type: protein-coding gene Cytoband: 16q23.1
Entrez ID: 10143 HGNC ID: HGNC:2052 Ensembl Gene: ENSG00000166509 OMIM ID: 613588
Drug and gene relationship at DGIdb

 

Expression of CLEC3A:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CLEC3A 10143 231802_at 0.0648 0.7784
GSE26886 CLEC3A 10143 231802_at 0.0355 0.7470
GSE45670 CLEC3A 10143 231802_at 0.0539 0.4285
GSE53622 CLEC3A 10143 121898 -0.4197 0.0133
GSE53624 CLEC3A 10143 121898 -0.6294 0.0000
GSE63941 CLEC3A 10143 231802_at 0.1131 0.4217
GSE77861 CLEC3A 10143 231802_at -0.0002 0.9982
TCGA CLEC3A 10143 RNAseq -2.7926 0.0522

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by CLEC3A expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of CLEC3A:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CLEC3A 10143 3 3 24
GSE20123 CLEC3A 10143 3 3 24
GSE43470 CLEC3A 10143 2 8 33
GSE46452 CLEC3A 10143 37 2 20
GSE47630 CLEC3A 10143 11 8 21
GSE54993 CLEC3A 10143 3 4 63
GSE54994 CLEC3A 10143 7 11 35
GSE60625 CLEC3A 10143 4 0 7
GSE74703 CLEC3A 10143 2 6 28
GSE74704 CLEC3A 10143 2 2 16
TCGA CLEC3A 10143 25 14 57

Total number of gains: 99; Total number of losses: 61; Total Number of normals: 328.  

 

Somatic mutations of CLEC3A:

 

Generating mutation plots.

 

Highly correlated genes for CLEC3A:

 

Showing all 2 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CLEC3ASSX10.643709303
CLEC3ASLC8A30.507713503

For details and further investigation, click here