LINC00836

 

Full name: long intergenic non-protein coding RNA 836 Alias Symbol: 
Type: non-coding RNA Cytoband: 10p12.1
Entrez ID: 101929052 HGNC ID: HGNC:44915 Ensembl Gene: ENSG00000280809 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of LINC00836:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LINC00836 101929052 240578_at 0.2848 0.3089
GSE26886 LINC00836 101929052 240578_at 0.0509 0.6669
GSE45670 LINC00836 101929052 240578_at 0.1547 0.0347
GSE63941 LINC00836 101929052 240578_at 0.0698 0.6739
GSE77861 LINC00836 101929052 240578_at -0.0820 0.6066
SRP133303 LINC00836 101929052 RNAseq 0.1144 0.6513

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Copy number change of LINC00836:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LINC00836 101929052 4 7 19
GSE20123 LINC00836 101929052 4 6 20
GSE43470 LINC00836 101929052 4 4 35
GSE46452 LINC00836 101929052 1 14 44
GSE47630 LINC00836 101929052 5 15 20
GSE54993 LINC00836 101929052 9 0 61
GSE54994 LINC00836 101929052 3 9 41
GSE60625 LINC00836 101929052 0 0 11
GSE74703 LINC00836 101929052 3 2 31
GSE74704 LINC00836 101929052 0 5 15

Total number of gains: 33; Total number of losses: 62; Total Number of normals: 297.  

 

Somatic mutations of LINC00836:

 

Generating mutation plots.

 

Highly correlated genes for LINC00836:

 

Showing all 2 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LINC00836LINC004540.605851303
LINC00836LINC003050.519077403

For details and further investigation, click here