LINC00305

 

Full name: long intergenic non-protein coding RNA 305 Alias Symbol: MGC39571|HsT1235
Type: non-coding RNA Cytoband: 18q22.1
Entrez ID: 221241 HGNC ID: HGNC:28597 Ensembl Gene: ENSG00000179676 OMIM ID: 617489
Drug and gene relationship at DGIdb

 

Expression of LINC00305:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LINC00305 221241 1553934_at 0.0256 0.9236
GSE26886 LINC00305 221241 1553934_at 0.0075 0.9407
GSE45670 LINC00305 221241 1553934_at 0.0902 0.2603
GSE53622 LINC00305 221241 72243 -0.4619 0.0000
GSE53624 LINC00305 221241 72243 -0.1929 0.0628
GSE63941 LINC00305 221241 1553934_at 0.0875 0.4823
GSE77861 LINC00305 221241 1553934_at -0.1105 0.3971

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by LINC00305 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of LINC00305:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LINC00305 221241 1 9 20
GSE20123 LINC00305 221241 1 9 20
GSE43470 LINC00305 221241 0 7 36
GSE46452 LINC00305 221241 1 26 32
GSE47630 LINC00305 221241 5 21 14
GSE54993 LINC00305 221241 9 0 61
GSE54994 LINC00305 221241 1 18 34
GSE60625 LINC00305 221241 0 4 7
GSE74703 LINC00305 221241 0 7 29
GSE74704 LINC00305 221241 1 6 13
TCGA LINC00305 221241 10 45 41

Total number of gains: 29; Total number of losses: 152; Total Number of normals: 307.  

 

Somatic mutations of LINC00305:

 

Generating mutation plots.

 

Highly correlated genes for LINC00305:

 

Showing all 5 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LINC00305ZNF2960.611787403
LINC00305CLIP1-AS10.605019303
LINC00305CDRT15L20.580699303
LINC00305LYPD40.564846403
LINC00305LINC008360.519077403

For details and further investigation, click here