LINC01012

 

Full name: long intergenic non-protein coding RNA 1012 Alias Symbol: 
Type: non-coding RNA Cytoband: 6p22.1
Entrez ID: 100507173 HGNC ID: HGNC:48986 Ensembl Gene:  OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of LINC01012:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LINC01012 100507173 1568826_at -0.0967 0.6858
GSE26886 LINC01012 100507173 1568826_at -0.0942 0.2652
GSE45670 LINC01012 100507173 1568826_at 0.0493 0.5719
GSE63941 LINC01012 100507173 1568826_at -0.1414 0.1543
GSE77861 LINC01012 100507173 1568826_at -0.0571 0.5702
SRP007169 LINC01012 100507173 RNAseq 0.5117 0.5034
SRP133303 LINC01012 100507173 RNAseq 0.2507 0.1722
SRP159526 LINC01012 100507173 RNAseq 0.3451 0.4761
SRP193095 LINC01012 100507173 RNAseq 0.2793 0.1039
SRP219564 LINC01012 100507173 RNAseq 0.4433 0.4413

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Copy number change of LINC01012:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LINC01012 100507173 4 2 24
GSE20123 LINC01012 100507173 4 2 24
GSE43470 LINC01012 100507173 5 0 38
GSE46452 LINC01012 100507173 1 10 48
GSE47630 LINC01012 100507173 7 4 29
GSE54993 LINC01012 100507173 2 1 67
GSE54994 LINC01012 100507173 11 4 38
GSE60625 LINC01012 100507173 0 1 10
GSE74703 LINC01012 100507173 5 0 31
GSE74704 LINC01012 100507173 0 1 19

Total number of gains: 39; Total number of losses: 25; Total Number of normals: 328.  

 

Somatic mutations of LINC01012:

 

Generating mutation plots.

 

Highly correlated genes for LINC01012:

 

Showing all 2 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LINC01012ZSCAN10.678102303
LINC01012VGLL20.57572303

For details and further investigation, click here