ZSCAN1

 

Full name: zinc finger and SCAN domain containing 1 Alias Symbol: FLJ33779|ZNF915
Type: protein-coding gene Cytoband: 19q13.43
Entrez ID: 284312 HGNC ID: HGNC:23712 Ensembl Gene: ENSG00000152467 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of ZSCAN1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZSCAN1 284312 1562651_at -0.1081 0.6858
GSE26886 ZSCAN1 284312 1562651_at -0.0917 0.3692
GSE45670 ZSCAN1 284312 1562651_at 0.1156 0.2814
GSE53622 ZSCAN1 284312 118978 1.1089 0.0000
GSE53624 ZSCAN1 284312 118978 0.7511 0.0000
GSE63941 ZSCAN1 284312 1562651_at 0.1638 0.3646
GSE77861 ZSCAN1 284312 1562651_at -0.1654 0.0687
GSE97050 ZSCAN1 284312 A_33_P3277826 0.2856 0.6114
TCGA ZSCAN1 284312 RNAseq -1.1600 0.1193

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by ZSCAN1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ZSCAN1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZSCAN1 284312 2 4 24
GSE20123 ZSCAN1 284312 2 3 25
GSE43470 ZSCAN1 284312 3 9 31
GSE46452 ZSCAN1 284312 45 1 13
GSE47630 ZSCAN1 284312 8 6 26
GSE54993 ZSCAN1 284312 18 4 48
GSE54994 ZSCAN1 284312 5 12 36
GSE60625 ZSCAN1 284312 9 0 2
GSE74703 ZSCAN1 284312 3 6 27
GSE74704 ZSCAN1 284312 2 1 17
TCGA ZSCAN1 284312 20 15 61

Total number of gains: 117; Total number of losses: 61; Total Number of normals: 310.  


 

Somatic mutations of ZSCAN1:

 

Generating mutation plots.

 

Highly correlated genes for ZSCAN1:

 

Showing top 20/125 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZSCAN1VGLL20.691102303
ZSCAN1LINC010120.678102303
ZSCAN1SIGLEC60.669615303
ZSCAN1TRIM30.669107303
ZSCAN1LINC003150.662177404
ZSCAN1NRSN20.658052303
ZSCAN1KIF120.648248404
ZSCAN1GPR37L10.638026403
ZSCAN1ANKUB10.629594303
ZSCAN1CRISP10.622062404
ZSCAN1CLYBL-AS10.620652303
ZSCAN1TAS2R430.618091303
ZSCAN1SPDYE30.616708303
ZSCAN1BTN1A10.611925404
ZSCAN1STARD7-AS10.611882303
ZSCAN1APOA50.610189504
ZSCAN1SYN30.609901504
ZSCAN1LRRTM20.609864403
ZSCAN1LINC012100.603694403
ZSCAN1HPYR10.59861303

For details and further investigation, click here