TMEM88B

 

Full name: transmembrane protein 88B Alias Symbol: 
Type: protein-coding gene Cytoband: 1p36.33
Entrez ID: 643965 HGNC ID: HGNC:37099 Ensembl Gene: ENSG00000205116 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of TMEM88B:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE53622 TMEM88B 643965 88685 0.1039 0.2460
GSE53624 TMEM88B 643965 88685 0.2458 0.0000
GSE97050 TMEM88B 643965 A_33_P3340862 0.0645 0.8020
TCGA TMEM88B 643965 RNAseq 2.1191 0.0312

Upregulated datasets: 1; Downregulated datasets: 0.  

 

Survival by TMEM88B expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of TMEM88B:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TMEM88B 643965 3 7 20
GSE20123 TMEM88B 643965 3 6 21
GSE43470 TMEM88B 643965 3 5 35
GSE46452 TMEM88B 643965 7 1 51
GSE47630 TMEM88B 643965 8 4 28
GSE54993 TMEM88B 643965 2 2 66
GSE54994 TMEM88B 643965 15 2 36
GSE60625 TMEM88B 643965 0 0 11
GSE74703 TMEM88B 643965 3 3 30
GSE74704 TMEM88B 643965 3 0 17
TCGA TMEM88B 643965 14 20 62

Total number of gains: 61; Total number of losses: 50; Total Number of normals: 377.  

 

Somatic mutations of TMEM88B:

 

Generating mutation plots.

 

Highly correlated genes for TMEM88B:

 

Showing all 1 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TMEM88BVSX10.64053303

For details and further investigation, click here