ZNF28

 

Full name: zinc finger protein 28 Alias Symbol: KOX24|DKFZp781D0275
Type: protein-coding gene Cytoband: 19q13.41
Entrez ID: 7576 HGNC ID: HGNC:13073 Ensembl Gene: ENSG00000198538 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of ZNF28:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZNF28 7576 1567853_at 0.1467 0.4969
GSE26886 ZNF28 7576 1567853_at -0.0455 0.6768
GSE45670 ZNF28 7576 1567853_at -0.0903 0.3864
GSE53622 ZNF28 7576 115768 0.2015 0.0315
GSE53624 ZNF28 7576 115768 0.0968 0.3092
GSE63941 ZNF28 7576 1567853_at 0.4515 0.0972
GSE77861 ZNF28 7576 1567853_at -0.0385 0.6779
GSE97050 ZNF28 7576 A_33_P3273290 -0.0451 0.9143
SRP007169 ZNF28 7576 RNAseq 0.4163 0.4202
SRP008496 ZNF28 7576 RNAseq 0.4486 0.2689
SRP064894 ZNF28 7576 RNAseq -0.1490 0.5971
SRP133303 ZNF28 7576 RNAseq 0.1061 0.6981
SRP159526 ZNF28 7576 RNAseq -0.8544 0.0489
SRP193095 ZNF28 7576 RNAseq -0.2462 0.0992
SRP219564 ZNF28 7576 RNAseq -0.2049 0.6900
TCGA ZNF28 7576 RNAseq -0.1437 0.2209

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by ZNF28 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of ZNF28:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZNF28 7576 3 4 23
GSE20123 ZNF28 7576 3 3 24
GSE43470 ZNF28 7576 2 11 30
GSE46452 ZNF28 7576 45 1 13
GSE47630 ZNF28 7576 9 6 25
GSE54993 ZNF28 7576 17 4 49
GSE54994 ZNF28 7576 4 14 35
GSE60625 ZNF28 7576 9 0 2
GSE74703 ZNF28 7576 2 7 27
GSE74704 ZNF28 7576 3 1 16
TCGA ZNF28 7576 17 19 60

Total number of gains: 114; Total number of losses: 70; Total Number of normals: 304.  

 

Somatic mutations of ZNF28:

 

Generating mutation plots.

 

Highly correlated genes for ZNF28:

 

Showing all 4 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZNF28INCENP0.577953303
ZNF28ANKRD18A0.564058303
ZNF28HIPK40.549752303
ZNF28ZNF3200.532646403

For details and further investigation, click here