CCDC171

 

Full name: coiled-coil domain containing 171 Alias Symbol: FLJ39267|FLJ46740|Em:AL513423.1|bA778P13.1|bA536D16.1
Type: protein-coding gene Cytoband: 9p22.3
Entrez ID: 203238 HGNC ID: HGNC:29828 Ensembl Gene: ENSG00000164989 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of CCDC171:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CCDC171 203238 1559672_a_at 0.1151 0.6164
GSE26886 CCDC171 203238 1558160_at -0.2200 0.0366
GSE45670 CCDC171 203238 1559672_a_at -0.1744 0.0484
GSE53622 CCDC171 203238 79447 -0.5668 0.0000
GSE53624 CCDC171 203238 79447 -0.3039 0.0019
GSE63941 CCDC171 203238 1559672_a_at 0.0793 0.8672
GSE77861 CCDC171 203238 242821_at -0.1321 0.1324
SRP007169 CCDC171 203238 RNAseq -0.4811 0.5135
SRP008496 CCDC171 203238 RNAseq 0.0504 0.9046
SRP064894 CCDC171 203238 RNAseq 0.1090 0.6029
SRP133303 CCDC171 203238 RNAseq -0.2438 0.3558
SRP159526 CCDC171 203238 RNAseq -0.4984 0.2372
SRP193095 CCDC171 203238 RNAseq -0.8174 0.0000
SRP219564 CCDC171 203238 RNAseq -0.7575 0.1015

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by CCDC171 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of CCDC171:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CCDC171 203238 2 16 12
GSE20123 CCDC171 203238 2 16 12
GSE43470 CCDC171 203238 5 11 27
GSE46452 CCDC171 203238 2 23 34
GSE47630 CCDC171 203238 4 26 10
GSE54993 CCDC171 203238 6 3 61
GSE54994 CCDC171 203238 10 16 27
GSE60625 CCDC171 203238 0 0 11
GSE74703 CCDC171 203238 5 8 23
GSE74704 CCDC171 203238 0 13 7
TCGA CCDC171 203238 14 51 31

Total number of gains: 50; Total number of losses: 183; Total Number of normals: 255.  

 

Somatic mutations of CCDC171:

 

Generating mutation plots.

 

Highly correlated genes for CCDC171:

 

Showing all 3 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CCDC171ITGA9-AS10.518288403
CCDC171TMPRSS150.517816403
CCDC171KAT70.504096503

For details and further investigation, click here