LINC00587

 

Full name: long intergenic non-protein coding RNA 587 Alias Symbol: bA785H23.1
Type: non-coding RNA Cytoband: 9q31.1
Entrez ID: 414319 HGNC ID: HGNC:31372 Ensembl Gene: ENSG00000204250 OMIM ID: 

 

Expression of LINC00587:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LINC00587 414319 1563260_at 0.0021 0.9955
GSE26886 LINC00587 414319 1563260_at -0.0341 0.7242
GSE45670 LINC00587 414319 1563260_at -0.0211 0.8291
GSE53622 LINC00587 414319 89955 -0.3585 0.0076
GSE53624 LINC00587 414319 89955 0.0230 0.8349
GSE63941 LINC00587 414319 1563260_at 0.1380 0.2954
GSE77861 LINC00587 414319 1563260_at -0.1213 0.2998

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by LINC00587 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of LINC00587:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LINC00587 414319 4 10 16
GSE20123 LINC00587 414319 5 9 16
GSE43470 LINC00587 414319 6 3 34
GSE46452 LINC00587 414319 6 13 40
GSE47630 LINC00587 414319 1 17 22
GSE54993 LINC00587 414319 3 3 64
GSE54994 LINC00587 414319 9 11 33
GSE60625 LINC00587 414319 0 0 11
GSE74703 LINC00587 414319 5 3 28
GSE74704 LINC00587 414319 2 6 12
TCGA LINC00587 414319 27 21 48

Total number of gains: 68; Total number of losses: 96; Total Number of normals: 324.  

 

Somatic mutations of LINC00587:

 

Generating mutation plots.

 

Highly correlated genes for LINC00587:

 

Showing all 4 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LINC00587LYPD40.621115504
LINC00587SLC25A470.569904403
LINC00587P2RX60.547828403
LINC00587ZCCHC180.511067403

For details and further investigation, click here