LINC00905

 

Full name: long intergenic non-protein coding RNA 905 Alias Symbol: FLJ25328
Type: non-coding RNA Cytoband: 19p13.12
Entrez ID: 148231 HGNC ID: HGNC:26334 Ensembl Gene: ENSG00000167459 OMIM ID: 

 

Expression of LINC00905:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LINC00905 148231 1562914_a_at 0.1473 0.5076
GSE26886 LINC00905 148231 1562914_a_at 0.0251 0.8404
GSE45670 LINC00905 148231 1562914_a_at 0.2153 0.0191
GSE53622 LINC00905 148231 15782 -0.1874 0.0635
GSE53624 LINC00905 148231 64208 -0.2741 0.0086
GSE63941 LINC00905 148231 1562914_a_at -0.2058 0.2285
GSE77861 LINC00905 148231 1562914_a_at 0.0224 0.8684

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by LINC00905 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of LINC00905:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LINC00905 148231 4 3 23
GSE20123 LINC00905 148231 3 2 25
GSE43470 LINC00905 148231 2 6 35
GSE46452 LINC00905 148231 47 1 11
GSE47630 LINC00905 148231 4 8 28
GSE54993 LINC00905 148231 15 4 51
GSE54994 LINC00905 148231 6 14 33
GSE60625 LINC00905 148231 9 0 2
GSE74703 LINC00905 148231 2 4 30
GSE74704 LINC00905 148231 0 1 19
TCGA LINC00905 148231 18 12 66

Total number of gains: 110; Total number of losses: 55; Total Number of normals: 323.  

 

Somatic mutations of LINC00905:

 

Generating mutation plots.

 

Highly correlated genes for LINC00905:

 

Showing all 3 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LINC00905LINC011070.635006303
LINC00905PSMA40.568936303
LINC00905E2F70.525564303

For details and further investigation, click here