PDCD4-AS1

 

Full name: PDCD4 antisense RNA 1 Alias Symbol: 
Type: non-coding RNA Cytoband: 10q25.2
Entrez ID: 282997 HGNC ID: HGNC:27425 Ensembl Gene: ENSG00000203497 OMIM ID: 

 

Expression of PDCD4-AS1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 PDCD4-AS1 282997 222307_at 0.0091 0.9826
GSE20347 PDCD4-AS1 282997 222307_at -0.1089 0.2869
GSE23400 PDCD4-AS1 282997 222307_at -0.0280 0.3090
GSE26886 PDCD4-AS1 282997 222307_at -0.0568 0.8556
GSE29001 PDCD4-AS1 282997 222307_at -0.1796 0.3555
GSE38129 PDCD4-AS1 282997 222307_at -0.1893 0.0280
GSE45670 PDCD4-AS1 282997 222307_at -0.1493 0.2547
GSE63941 PDCD4-AS1 282997 222307_at -0.1417 0.7065
GSE77861 PDCD4-AS1 282997 222307_at -0.1737 0.0862
SRP064894 PDCD4-AS1 282997 RNAseq -0.2978 0.2051
SRP133303 PDCD4-AS1 282997 RNAseq -0.3471 0.0113
SRP159526 PDCD4-AS1 282997 RNAseq -0.7220 0.0348
SRP193095 PDCD4-AS1 282997 RNAseq -0.1571 0.2621
SRP219564 PDCD4-AS1 282997 RNAseq 0.0487 0.9183

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Copy number change of PDCD4-AS1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 PDCD4-AS1 282997 1 9 20
GSE20123 PDCD4-AS1 282997 1 8 21
GSE43470 PDCD4-AS1 282997 0 7 36
GSE46452 PDCD4-AS1 282997 0 11 48
GSE47630 PDCD4-AS1 282997 2 14 24
GSE54993 PDCD4-AS1 282997 8 0 62
GSE54994 PDCD4-AS1 282997 1 10 42
GSE60625 PDCD4-AS1 282997 0 0 11
GSE74703 PDCD4-AS1 282997 0 5 31
GSE74704 PDCD4-AS1 282997 1 4 15

Total number of gains: 14; Total number of losses: 68; Total Number of normals: 310.  

 

Somatic mutations of PDCD4-AS1:

 

Generating mutation plots.

 

Highly correlated genes for PDCD4-AS1:

 

Showing all 2 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
PDCD4-AS1SEC24B-AS10.568762303
PDCD4-AS1IPCEF10.516925403

For details and further investigation, click here