| Full name: SEC24B antisense RNA 1 | Alias Symbol: 1/2-SBSRNA4 | ||
| Type: non-coding RNA | Cytoband: 4q25 | ||
| Entrez ID: 100533182 | HGNC ID: HGNC:44003 | Ensembl Gene: ENSG00000247950 | OMIM ID: |
Expression of SEC24B-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SEC24B-AS1 | 100533182 | 1569713_at | -0.0779 | 0.8823 | |
| GSE26886 | SEC24B-AS1 | 100533182 | 1569713_at | 0.1951 | 0.3264 | |
| GSE45670 | SEC24B-AS1 | 100533182 | 1569713_at | -0.1794 | 0.1776 | |
| GSE53622 | SEC24B-AS1 | 100533182 | 94466 | -0.1672 | 0.1351 | |
| GSE53624 | SEC24B-AS1 | 100533182 | 94466 | 0.0564 | 0.5037 | |
| GSE63941 | SEC24B-AS1 | 100533182 | 1569713_at | -0.0294 | 0.9345 | |
| GSE77861 | SEC24B-AS1 | 100533182 | 1569713_at | -0.1875 | 0.0614 | |
| SRP133303 | SEC24B-AS1 | 100533182 | RNAseq | -0.1609 | 0.3638 | |
| SRP159526 | SEC24B-AS1 | 100533182 | RNAseq | 0.8274 | 0.1115 | |
| SRP193095 | SEC24B-AS1 | 100533182 | RNAseq | -0.1745 | 0.2739 | |
| SRP219564 | SEC24B-AS1 | 100533182 | RNAseq | -0.5017 | 0.2349 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SEC24B-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of SEC24B-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SEC24B-AS1 | 100533182 | 1 | 12 | 17 | |
| GSE20123 | SEC24B-AS1 | 100533182 | 1 | 12 | 17 | |
| GSE43470 | SEC24B-AS1 | 100533182 | 0 | 13 | 30 | |
| GSE46452 | SEC24B-AS1 | 100533182 | 1 | 36 | 22 | |
| GSE47630 | SEC24B-AS1 | 100533182 | 0 | 20 | 20 | |
| GSE54993 | SEC24B-AS1 | 100533182 | 9 | 0 | 61 | |
| GSE54994 | SEC24B-AS1 | 100533182 | 1 | 10 | 42 | |
| GSE60625 | SEC24B-AS1 | 100533182 | 0 | 3 | 8 | |
| GSE74703 | SEC24B-AS1 | 100533182 | 0 | 11 | 25 | |
| GSE74704 | SEC24B-AS1 | 100533182 | 0 | 6 | 14 |
Total number of gains: 13; Total number of losses: 123; Total Number of normals: 256.
Somatic mutations of SEC24B-AS1:
Generating mutation plots.
Highly correlated genes for SEC24B-AS1:
Showing top 20/30 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SEC24B-AS1 | ZNF682 | 0.719346 | 3 | 0 | 3 |
| SEC24B-AS1 | ZNF436 | 0.665619 | 3 | 0 | 3 |
| SEC24B-AS1 | NIPSNAP3A | 0.62893 | 3 | 0 | 3 |
| SEC24B-AS1 | SLC37A1 | 0.626431 | 3 | 0 | 3 |
| SEC24B-AS1 | MRPL20 | 0.610925 | 3 | 0 | 3 |
| SEC24B-AS1 | FAM221A | 0.609591 | 3 | 0 | 3 |
| SEC24B-AS1 | TMBIM4 | 0.604091 | 3 | 0 | 3 |
| SEC24B-AS1 | TMEM243 | 0.598879 | 4 | 0 | 3 |
| SEC24B-AS1 | MYO5C | 0.594567 | 3 | 0 | 3 |
| SEC24B-AS1 | TRIM52 | 0.593632 | 3 | 0 | 3 |
| SEC24B-AS1 | PANK1 | 0.590519 | 4 | 0 | 3 |
| SEC24B-AS1 | ZNF626 | 0.583501 | 3 | 0 | 3 |
| SEC24B-AS1 | MTMR10 | 0.581692 | 3 | 0 | 3 |
| SEC24B-AS1 | GPR143 | 0.570351 | 3 | 0 | 3 |
| SEC24B-AS1 | KIAA1211L | 0.570209 | 3 | 0 | 3 |
| SEC24B-AS1 | NHS | 0.570022 | 4 | 0 | 3 |
| SEC24B-AS1 | PDCD4-AS1 | 0.568762 | 3 | 0 | 3 |
| SEC24B-AS1 | VPS36 | 0.565972 | 4 | 0 | 3 |
| SEC24B-AS1 | FRAT1 | 0.559136 | 4 | 0 | 3 |
| SEC24B-AS1 | TIGD2 | 0.558171 | 3 | 0 | 3 |
For details and further investigation, click here
