GAS5-AS1

 

Full name: GAS5 antisense RNA 1 Alias Symbol: 
Type: non-coding RNA Cytoband: 1q25.1
Entrez ID: 100506046 HGNC ID: HGNC:44119 Ensembl Gene: ENSG00000270084 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of GAS5-AS1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 GAS5-AS1 100506046 235712_at 0.1025 0.7767
GSE26886 GAS5-AS1 100506046 235712_at 0.0374 0.7524
GSE45670 GAS5-AS1 100506046 235712_at -0.1046 0.3208
GSE53622 GAS5-AS1 100506046 29940 -0.1577 0.0406
GSE53624 GAS5-AS1 100506046 29940 -0.0129 0.8939
GSE63941 GAS5-AS1 100506046 235712_at 0.0697 0.7571
GSE77861 GAS5-AS1 100506046 235712_at 0.0024 0.9880
SRP133303 GAS5-AS1 100506046 RNAseq -0.0500 0.8825
SRP193095 GAS5-AS1 100506046 RNAseq 0.2307 0.1551

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by GAS5-AS1 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of GAS5-AS1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 GAS5-AS1 100506046 12 0 18
GSE20123 GAS5-AS1 100506046 12 0 18
GSE43470 GAS5-AS1 100506046 7 2 34
GSE46452 GAS5-AS1 100506046 3 1 55
GSE47630 GAS5-AS1 100506046 14 0 26
GSE54993 GAS5-AS1 100506046 0 6 64
GSE54994 GAS5-AS1 100506046 15 0 38
GSE60625 GAS5-AS1 100506046 0 0 11
GSE74703 GAS5-AS1 100506046 7 2 27
GSE74704 GAS5-AS1 100506046 5 0 15

Total number of gains: 75; Total number of losses: 11; Total Number of normals: 306.  

 

Somatic mutations of GAS5-AS1:

 

Generating mutation plots.

 

Highly correlated genes for GAS5-AS1:

 

Showing all 4 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
GAS5-AS1NALCN-AS10.580861403
GAS5-AS1FAM216B0.569386303
GAS5-AS1HIC10.524305303
GAS5-AS1C50.511526403

For details and further investigation, click here