LHFPL3-AS1

 

Full name: LHFPL3 antisense RNA 1 Alias Symbol: 
Type: non-coding RNA Cytoband: 7q22.2
Entrez ID: 645591 HGNC ID: HGNC:40341 Ensembl Gene: ENSG00000226869 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of LHFPL3-AS1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LHFPL3-AS1 645591 1554302_s_at -0.0106 0.9714
GSE26886 LHFPL3-AS1 645591 1554302_s_at 0.0074 0.9496
GSE45670 LHFPL3-AS1 645591 1554302_s_at 0.0656 0.3585
GSE53622 LHFPL3-AS1 645591 12472 0.1832 0.1567
GSE53624 LHFPL3-AS1 645591 12472 0.2667 0.0417
GSE63941 LHFPL3-AS1 645591 1554302_s_at 0.0409 0.7701
GSE77861 LHFPL3-AS1 645591 1554302_s_at -0.0928 0.4115

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by LHFPL3-AS1 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of LHFPL3-AS1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LHFPL3-AS1 645591 14 0 16
GSE20123 LHFPL3-AS1 645591 14 0 16
GSE43470 LHFPL3-AS1 645591 7 1 35
GSE46452 LHFPL3-AS1 645591 10 1 48
GSE47630 LHFPL3-AS1 645591 7 3 30
GSE54993 LHFPL3-AS1 645591 2 10 58
GSE54994 LHFPL3-AS1 645591 16 3 34
GSE60625 LHFPL3-AS1 645591 0 0 11
GSE74703 LHFPL3-AS1 645591 7 1 28
GSE74704 LHFPL3-AS1 645591 9 0 11

Total number of gains: 86; Total number of losses: 19; Total Number of normals: 287.  

 

Somatic mutations of LHFPL3-AS1:

 

Generating mutation plots.

 

Highly correlated genes for LHFPL3-AS1:

 

Showing all 4 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LHFPL3-AS1DLX20.658236303
LHFPL3-AS1ADAM180.611513303
LHFPL3-AS1DPYSL50.608006303
LHFPL3-AS1OR51B40.51743403

For details and further investigation, click here