RPL13

 

Full name: ribosomal protein L13 Alias Symbol: D16S444E|BBC1|L13
Type: protein-coding gene Cytoband: 16q24.3
Entrez ID: 6137 HGNC ID: HGNC:10303 Ensembl Gene: ENSG00000167526 OMIM ID: 113703
Drug and gene relationship at DGIdb

 

Expression of RPL13:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE53622 RPL13 6137 62043 -0.1080 0.1659
GSE53624 RPL13 6137 62043 0.0534 0.3290
GSE97050 RPL13 6137 A_24_P142228 -0.4241 0.2662
SRP007169 RPL13 6137 RNAseq -1.3152 0.0002
SRP008496 RPL13 6137 RNAseq -1.0992 0.0003
SRP064894 RPL13 6137 RNAseq -0.7995 0.0260
SRP133303 RPL13 6137 RNAseq -0.2925 0.2429
SRP159526 RPL13 6137 RNAseq -0.3602 0.2323
SRP193095 RPL13 6137 RNAseq -0.7595 0.0000
SRP219564 RPL13 6137 RNAseq -0.3165 0.3817
TCGA RPL13 6137 RNAseq -0.0065 0.8952

Upregulated datasets: 0; Downregulated datasets: 2.  

 

Survival by RPL13 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of RPL13:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 RPL13 6137 4 3 23
GSE20123 RPL13 6137 4 3 23
GSE43470 RPL13 6137 1 13 29
GSE46452 RPL13 6137 38 1 20
GSE47630 RPL13 6137 11 9 20
GSE54993 RPL13 6137 3 4 63
GSE54994 RPL13 6137 9 11 33
GSE60625 RPL13 6137 4 0 7
GSE74703 RPL13 6137 1 9 26
GSE74704 RPL13 6137 3 1 16
TCGA RPL13 6137 26 15 55

Total number of gains: 104; Total number of losses: 69; Total Number of normals: 315.  

 

Somatic mutations of RPL13:

 

Generating mutation plots.

 

Highly correlated genes for RPL13:

 

Showing all 3 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
RPL13RPL60.607998303
RPL13RPL360.593682303
RPL13RPL230.565538303

For details and further investigation, click here