RPL36

 

Full name: ribosomal protein L36 Alias Symbol: DKFZp566B023|L36
Type: protein-coding gene Cytoband: 19p13.2
Entrez ID: 25873 HGNC ID: HGNC:13631 Ensembl Gene: ENSG00000130255 OMIM ID: 617893
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of RPL36:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 RPL36 25873 219762_s_at -0.1107 0.7734
GSE20347 RPL36 25873 219762_s_at -0.1488 0.2431
GSE23400 RPL36 25873 219762_s_at -0.0431 0.6726
GSE26886 RPL36 25873 219762_s_at 0.6663 0.0128
GSE29001 RPL36 25873 219762_s_at -0.2528 0.4333
GSE38129 RPL36 25873 219762_s_at 0.0979 0.4063
GSE45670 RPL36 25873 219762_s_at -0.0343 0.7814
GSE53622 RPL36 25873 9948 -0.3453 0.0000
GSE53624 RPL36 25873 9948 0.0968 0.0561
GSE63941 RPL36 25873 219762_s_at 0.0136 0.9735
GSE77861 RPL36 25873 219762_s_at -0.0711 0.8135
GSE97050 RPL36 25873 A_23_P153383 -0.1431 0.6467
SRP007169 RPL36 25873 RNAseq -1.1201 0.0015
SRP008496 RPL36 25873 RNAseq -0.8410 0.0000
SRP064894 RPL36 25873 RNAseq 0.2314 0.6047
SRP133303 RPL36 25873 RNAseq -0.4737 0.0363
SRP159526 RPL36 25873 RNAseq -0.5761 0.0016
SRP193095 RPL36 25873 RNAseq -0.8173 0.0000
SRP219564 RPL36 25873 RNAseq -0.0942 0.7312
TCGA RPL36 25873 RNAseq 0.0516 0.3467

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by RPL36 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of RPL36:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 RPL36 25873 5 3 22
GSE20123 RPL36 25873 4 2 24
GSE43470 RPL36 25873 2 6 35
GSE46452 RPL36 25873 47 1 11
GSE47630 RPL36 25873 5 7 28
GSE54993 RPL36 25873 16 3 51
GSE54994 RPL36 25873 6 16 31
GSE60625 RPL36 25873 9 0 2
GSE74703 RPL36 25873 2 4 30
GSE74704 RPL36 25873 1 2 17
TCGA RPL36 25873 10 18 68

Total number of gains: 107; Total number of losses: 62; Total Number of normals: 319.  


 

Somatic mutations of RPL36:

 

Generating mutation plots.

 

Highly correlated genes for RPL36:

 

Showing top 20/79 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
RPL36DNAJC40.72859303
RPL36RPL18A0.67447303
RPL36RHPN10.656521303
RPL36RPL390.636522604
RPL36RPL120.63578711011
RPL36RPS150.63200512010
RPL36RPS280.6311511109
RPL36RPL310.62425110010
RPL36RPL350.6237931109
RPL36RPS130.621465404
RPL36PHPT10.61462303
RPL36RPS50.6040121109
RPL36UBA520.6031341209
RPL36ATAD3A0.60266303
RPL36ITIH40.602532303
RPL36RPL130.593682303
RPL36GLB1L20.593681303
RPL36EEF20.5920061008
RPL36RPL230.586785303
RPL36DNM20.584881403

For details and further investigation, click here