SLC35F4

 

Full name: solute carrier family 35 member F4 Alias Symbol: FLJ37712
Type: protein-coding gene Cytoband: 14q22.3-q23.1
Entrez ID: 341880 HGNC ID: HGNC:19845 Ensembl Gene: ENSG00000151812 OMIM ID: 

 

Expression of SLC35F4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SLC35F4 341880 240799_at 0.0959 0.6141
GSE26886 SLC35F4 341880 240799_at 0.0843 0.4537
GSE45670 SLC35F4 341880 240799_at 0.0545 0.5832
GSE53622 SLC35F4 341880 37199 -0.0810 0.4315
GSE53624 SLC35F4 341880 37199 -0.0203 0.8176
GSE63941 SLC35F4 341880 240799_at -0.1176 0.5153
GSE77861 SLC35F4 341880 240799_at -0.0649 0.4232
SRP133303 SLC35F4 341880 RNAseq 0.8478 0.0164
TCGA SLC35F4 341880 RNAseq 1.6186 0.0918

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by SLC35F4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of SLC35F4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SLC35F4 341880 8 3 19
GSE20123 SLC35F4 341880 8 3 19
GSE43470 SLC35F4 341880 8 2 33
GSE46452 SLC35F4 341880 16 3 40
GSE47630 SLC35F4 341880 11 10 19
GSE54993 SLC35F4 341880 3 8 59
GSE54994 SLC35F4 341880 19 4 30
GSE60625 SLC35F4 341880 0 2 9
GSE74703 SLC35F4 341880 7 2 27
GSE74704 SLC35F4 341880 3 2 15
TCGA SLC35F4 341880 32 14 50

Total number of gains: 115; Total number of losses: 53; Total Number of normals: 320.  

 

Somatic mutations of SLC35F4:

 

Generating mutation plots.

 

Highly correlated genes for SLC35F4:

 

Showing all 8 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SLC35F4RNF157-AS10.607719303
SLC35F4ACTL100.593311303
SLC35F4OTOGL0.576097303
SLC35F4ZNF1970.569349303
SLC35F4TMPRSS150.531344403
SLC35F4SEC14L30.530978404
SLC35F4OPRD10.523958503
SLC35F4NDST30.511785403

For details and further investigation, click here