SEC14L3

 

Full name: SEC14 like lipid binding 3 Alias Symbol: TAP2
Type: protein-coding gene Cytoband: 22q12.2
Entrez ID: 266629 HGNC ID: HGNC:18655 Ensembl Gene: ENSG00000100012 OMIM ID: 612824
Drug and gene relationship at DGIdb

 

Expression of SEC14L3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SEC14L3 266629 241221_at 0.0653 0.8264
GSE20347 SEC14L3 266629 216346_at -0.1751 0.0026
GSE23400 SEC14L3 266629 216346_at -0.2178 0.0000
GSE26886 SEC14L3 266629 241221_at 0.2057 0.1231
GSE29001 SEC14L3 266629 216346_at -0.2537 0.0403
GSE38129 SEC14L3 266629 216346_at -0.1715 0.0015
GSE45670 SEC14L3 266629 241221_at 0.1192 0.2097
GSE53622 SEC14L3 266629 31264 -0.1643 0.0214
GSE53624 SEC14L3 266629 31264 -0.2772 0.0004
GSE63941 SEC14L3 266629 241221_at 0.1320 0.4137
GSE77861 SEC14L3 266629 240699_at -0.2397 0.0938
GSE97050 SEC14L3 266629 A_33_P3383551 -0.1957 0.3038

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by SEC14L3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SEC14L3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SEC14L3 266629 4 5 21
GSE20123 SEC14L3 266629 4 4 22
GSE43470 SEC14L3 266629 4 6 33
GSE46452 SEC14L3 266629 31 1 27
GSE47630 SEC14L3 266629 8 5 27
GSE54993 SEC14L3 266629 3 6 61
GSE54994 SEC14L3 266629 11 8 34
GSE60625 SEC14L3 266629 5 0 6
GSE74703 SEC14L3 266629 4 5 27
GSE74704 SEC14L3 266629 1 1 18
TCGA SEC14L3 266629 27 15 54

Total number of gains: 102; Total number of losses: 56; Total Number of normals: 330.  


 

Somatic mutations of SEC14L3:

 

Generating mutation plots.

 

Highly correlated genes for SEC14L3:

 

Showing top 20/584 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SEC14L3CCDC1660.741143303
SEC14L3TMEM2170.738969404
SEC14L3NLRP50.736933303
SEC14L3ZNF1820.736721303
SEC14L3PADI60.724593303
SEC14L3APOA10.720708404
SEC14L3SKAP10.71855303
SEC14L3ALDH1L10.71791303
SEC14L3CCKBR0.710031404
SEC14L3OR1F10.70941404
SEC14L3WDR780.707743303
SEC14L3LYPD40.704209303
SEC14L3LRRC720.698299303
SEC14L3MAGEA80.698048303
SEC14L3PPP1R3F0.693886403
SEC14L3RHBG0.691261605
SEC14L3C19orf730.691204403
SEC14L3CEND10.68123303
SEC14L3BCAN0.680673303
SEC14L3ACSM50.679859404

For details and further investigation, click here