SMIM21

 

Full name: small integral membrane protein 21 Alias Symbol: 
Type: protein-coding gene Cytoband: 18q23
Entrez ID: 284274 HGNC ID: HGNC:27598 Ensembl Gene: ENSG00000206026 OMIM ID: 

 

Expression of SMIM21:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SMIM21 284274 1564400_at 0.1073 0.5361
GSE26886 SMIM21 284274 1564400_at 0.0129 0.9151
GSE45670 SMIM21 284274 1564400_at 0.0923 0.1625
GSE53622 SMIM21 284274 46197 -0.0509 0.6465
GSE53624 SMIM21 284274 46197 0.3927 0.0005
GSE63941 SMIM21 284274 1564400_at 0.1150 0.3544
GSE77861 SMIM21 284274 1564400_at -0.0581 0.6028

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by SMIM21 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of SMIM21:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SMIM21 284274 0 11 19
GSE20123 SMIM21 284274 0 11 19
GSE43470 SMIM21 284274 0 8 35
GSE46452 SMIM21 284274 1 26 32
GSE47630 SMIM21 284274 5 22 13
GSE54993 SMIM21 284274 9 0 61
GSE54994 SMIM21 284274 1 18 34
GSE60625 SMIM21 284274 0 4 7
GSE74703 SMIM21 284274 0 7 29
GSE74704 SMIM21 284274 0 9 11
TCGA SMIM21 284274 7 47 42

Total number of gains: 23; Total number of losses: 163; Total Number of normals: 302.  

 

Somatic mutations of SMIM21:

 

Generating mutation plots.

 

Highly correlated genes for SMIM21:

 

Showing all 6 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SMIM21LINC010290.638118303
SMIM21OR1F10.609781303
SMIM21C7orf610.553956303
SMIM21CPSF10.525737303
SMIM21NANOS30.524044303
SMIM21OR10A30.502549403

For details and further investigation, click here