CCDC85A

 

Full name: coiled-coil domain containing 85A Alias Symbol: KIAA1912
Type: protein-coding gene Cytoband: 2p16.1
Entrez ID: 114800 HGNC ID: HGNC:29400 Ensembl Gene: ENSG00000055813 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of CCDC85A:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE26886 CCDC85A 114800 233846_at 0.2523 0.0740
GSE63941 CCDC85A 114800 233846_at 0.1818 0.4569
GSE97050 CCDC85A 114800 A_23_P349566 -0.1851 0.4168
SRP133303 CCDC85A 114800 RNAseq -0.3642 0.3905
SRP159526 CCDC85A 114800 RNAseq -0.6397 0.2611
SRP219564 CCDC85A 114800 RNAseq 1.8635 0.0717
TCGA CCDC85A 114800 RNAseq -1.1200 0.0002

Upregulated datasets: 0; Downregulated datasets: 1.  

 

Survival by CCDC85A expression:

 

TCGA

 

Note: Click image to view full size file.  

Copy number change of CCDC85A:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CCDC85A 114800 9 1 20
GSE20123 CCDC85A 114800 8 1 21
GSE43470 CCDC85A 114800 5 0 38
GSE46452 CCDC85A 114800 2 3 54
GSE47630 CCDC85A 114800 8 0 32
GSE54993 CCDC85A 114800 0 6 64
GSE54994 CCDC85A 114800 12 0 41
GSE60625 CCDC85A 114800 0 3 8
GSE74703 CCDC85A 114800 5 0 31
GSE74704 CCDC85A 114800 9 1 10
TCGA CCDC85A 114800 36 2 58

Total number of gains: 94; Total number of losses: 17; Total Number of normals: 377.  

 

Somatic mutations of CCDC85A:

 

Generating mutation plots.

 

Highly correlated genes for CCDC85A:

 

Showing all 6 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CCDC85AVSX10.751045303
CCDC85APCYT1B0.663557303
CCDC85ATACR20.632366303
CCDC85AADRB30.631266303
CCDC85AZNF4830.598572303
CCDC85ASULT1C20.533955303

For details and further investigation, click here