CCL3L1

 

Full name: C-C motif chemokine ligand 3 like 1 Alias Symbol: G0S19-2|LD78BETA
Type: protein-coding gene Cytoband: 17q12 alternate reference locus
Entrez ID: 6349 HGNC ID: HGNC:10628 Ensembl Gene: ENSG00000277796 OMIM ID: 601395

 

CCL3L1 involved pathways:

KEGG pathway Description View
hsa04062Chemokine signaling pathway
hsa04062Chemokine signaling pathway
hsa04620Toll-like receptor signaling pathway
hsa04620Toll-like receptor signaling pathway

 

Expression of CCL3L1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE53622 CCL3L1 6349 57424 1.2029 0.0000
GSE53624 CCL3L1 6349 46544 1.8830 0.0000
SRP064894 CCL3L1 6349 RNAseq 2.5267 0.0000
SRP133303 CCL3L1 6349 RNAseq 2.1333 0.0001
SRP159526 CCL3L1 6349 RNAseq 0.9873 0.0807
SRP219564 CCL3L1 6349 RNAseq 2.2220 0.0002
TCGA CCL3L1 6349 RNAseq 3.1461 0.0000

Upregulated datasets: 6; Downregulated datasets: 0.  

 

Survival by CCL3L1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of CCL3L1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CCL3L1 6349 5 1 24
GSE20123 CCL3L1 6349 5 1 24
GSE43470 CCL3L1 6349 1 2 40
GSE46452 CCL3L1 6349 34 0 25
GSE47630 CCL3L1 6349 8 1 31
GSE54993 CCL3L1 6349 3 3 64
GSE54994 CCL3L1 6349 8 6 39
GSE60625 CCL3L1 6349 4 0 7
GSE74703 CCL3L1 6349 1 1 34
GSE74704 CCL3L1 6349 3 1 16
TCGA CCL3L1 6349 20 9 67

Total number of gains: 92; Total number of losses: 25; Total Number of normals: 371.  

 

Somatic mutations of CCL3L1:

 

Generating mutation plots.

 

Highly correlated genes for CCL3L1:

 

Showing all 5 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CCL3L1CCL4L20.727346303
CCL3L1FCGR2A0.672015303
CCL3L1G0S20.670698303
CCL3L1SLC7A70.609068303
CCL3L1CCL80.563013303

For details and further investigation, click here