LDLRAD1

 

Full name: low density lipoprotein receptor class A domain containing 1 Alias Symbol: 
Type: protein-coding gene Cytoband: 1p32.3
Entrez ID: 388633 HGNC ID: HGNC:32069 Ensembl Gene: ENSG00000203985 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of LDLRAD1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE53622 LDLRAD1 388633 127695 -0.4858 0.0003
GSE53624 LDLRAD1 388633 127695 -0.7890 0.0000
GSE97050 LDLRAD1 388633 A_24_P491397 -0.0039 0.9878
SRP133303 LDLRAD1 388633 RNAseq -0.1788 0.7305
SRP159526 LDLRAD1 388633 RNAseq -0.8309 0.2274
SRP193095 LDLRAD1 388633 RNAseq 0.1221 0.5119
TCGA LDLRAD1 388633 RNAseq 0.3467 0.7901

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by LDLRAD1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of LDLRAD1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LDLRAD1 388633 3 4 23
GSE20123 LDLRAD1 388633 3 3 24
GSE43470 LDLRAD1 388633 6 2 35
GSE46452 LDLRAD1 388633 2 1 56
GSE47630 LDLRAD1 388633 8 4 28
GSE54993 LDLRAD1 388633 0 0 70
GSE54994 LDLRAD1 388633 10 2 41
GSE60625 LDLRAD1 388633 0 0 11
GSE74703 LDLRAD1 388633 4 1 31
GSE74704 LDLRAD1 388633 2 0 18
TCGA LDLRAD1 388633 10 18 68

Total number of gains: 48; Total number of losses: 35; Total Number of normals: 405.  

 

Somatic mutations of LDLRAD1:

 

Generating mutation plots.

 

Highly correlated genes for LDLRAD1:

 

Showing all 4 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LDLRAD1CLDN240.660347303
LDLRAD1RASGEF1C0.655159303
LDLRAD1AQP50.643668303
LDLRAD1CRTC10.536795303

For details and further investigation, click here