LINC00607

 

Full name: long intergenic non-protein coding RNA 607 Alias Symbol: 
Type: non-coding RNA Cytoband: 2q35
Entrez ID: 646324 HGNC ID: HGNC:43944 Ensembl Gene: ENSG00000235770 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of LINC00607:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LINC00607 646324 1564200_at -0.0326 0.9250
GSE26886 LINC00607 646324 1564200_at 0.0646 0.5750
GSE45670 LINC00607 646324 1564200_at 0.0277 0.8184
GSE53622 LINC00607 646324 4952 -0.1079 0.4685
GSE53624 LINC00607 646324 4952 -0.0327 0.8036
GSE63941 LINC00607 646324 1564200_at -0.2291 0.0780
GSE77861 LINC00607 646324 1564200_at 0.0234 0.8586
SRP064894 LINC00607 646324 RNAseq -0.1345 0.6739
SRP133303 LINC00607 646324 RNAseq -0.2553 0.1534
SRP159526 LINC00607 646324 RNAseq -0.8882 0.0419
SRP219564 LINC00607 646324 RNAseq -0.8588 0.0506

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by LINC00607 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of LINC00607:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LINC00607 646324 1 13 16
GSE20123 LINC00607 646324 1 13 16
GSE43470 LINC00607 646324 0 7 36
GSE46452 LINC00607 646324 0 5 54
GSE47630 LINC00607 646324 4 5 31
GSE54993 LINC00607 646324 0 3 67
GSE54994 LINC00607 646324 8 9 36
GSE60625 LINC00607 646324 0 3 8
GSE74703 LINC00607 646324 0 6 30
GSE74704 LINC00607 646324 1 7 12
TCGA LINC00607 646324 12 27 57

Total number of gains: 27; Total number of losses: 98; Total Number of normals: 363.  

 

Somatic mutations of LINC00607:

 

Generating mutation plots.

 

Highly correlated genes for LINC00607:

 

Showing all 7 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LINC00607PARP100.647518303
LINC00607TMEM132D0.596696303
LINC00607GSC0.594041303
LINC00607LINC011020.572021503
LINC00607TMEM1550.55768303
LINC00607GPM6A0.533817503
LINC00607MYO7A0.514787303

For details and further investigation, click here