LINC00881

 

Full name: long intergenic non-protein coding RNA 881 Alias Symbol: 
Type: non-coding RNA Cytoband: 3q25.31
Entrez ID: 100498859 HGNC ID: HGNC:48567 Ensembl Gene: ENSG00000241135 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of LINC00881:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LINC00881 100498859 243687_at -0.0254 0.9317
GSE26886 LINC00881 100498859 243687_at -0.0319 0.7930
GSE45670 LINC00881 100498859 243687_at 0.0765 0.3269
GSE53622 LINC00881 100498859 47118 -0.0526 0.8206
GSE53624 LINC00881 100498859 47118 0.0914 0.3788
GSE63941 LINC00881 100498859 243687_at -0.0513 0.7804
GSE77861 LINC00881 100498859 243687_at -0.0738 0.4530
SRP133303 LINC00881 100498859 RNAseq 0.0404 0.8073

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by LINC00881 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of LINC00881:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LINC00881 100498859 21 1 8
GSE20123 LINC00881 100498859 21 1 8
GSE43470 LINC00881 100498859 23 0 20
GSE46452 LINC00881 100498859 18 2 39
GSE47630 LINC00881 100498859 19 3 18
GSE54993 LINC00881 100498859 1 11 58
GSE54994 LINC00881 100498859 38 1 14
GSE60625 LINC00881 100498859 0 6 5
GSE74703 LINC00881 100498859 20 0 16
GSE74704 LINC00881 100498859 14 0 6
TCGA LINC00881 100498859 74 1 21

Total number of gains: 249; Total number of losses: 26; Total Number of normals: 213.  

 

Somatic mutations of LINC00881:

 

Generating mutation plots.

 

Highly correlated genes for LINC00881:

 

Showing all 7 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LINC00881LINC004870.618731303
LINC00881ZEB1-AS10.605557303
LINC00881LINC013100.58109403
LINC00881TTN-AS10.580127403
LINC00881MATN1-AS10.579688303
LINC00881LINC001610.53428403
LINC00881ALPL0.521527303

For details and further investigation, click here