| Full name: long intergenic non-protein coding RNA 161 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 21q21.3 | ||
| Entrez ID: 118421 | HGNC ID: HGNC:17138 | Ensembl Gene: ENSG00000226935 | OMIM ID: |
Expression of LINC00161:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00161 | 118421 | 1554405_a_at | 0.0230 | 0.9319 | |
| GSE26886 | LINC00161 | 118421 | 1554405_a_at | 0.1793 | 0.1508 | |
| GSE45670 | LINC00161 | 118421 | 1554405_a_at | 0.1544 | 0.0175 | |
| GSE53622 | LINC00161 | 118421 | 8952 | 0.2537 | 0.0127 | |
| GSE53624 | LINC00161 | 118421 | 8952 | 0.3058 | 0.0155 | |
| GSE63941 | LINC00161 | 118421 | 1554405_a_at | 0.1004 | 0.4834 | |
| GSE77861 | LINC00161 | 118421 | 1554405_a_at | -0.0206 | 0.8141 | |
| SRP133303 | LINC00161 | 118421 | RNAseq | 0.1702 | 0.5535 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC00161 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00161:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00161 | 118421 | 2 | 9 | 19 | |
| GSE20123 | LINC00161 | 118421 | 2 | 9 | 19 | |
| GSE43470 | LINC00161 | 118421 | 1 | 8 | 34 | |
| GSE46452 | LINC00161 | 118421 | 1 | 21 | 37 | |
| GSE47630 | LINC00161 | 118421 | 6 | 17 | 17 | |
| GSE54993 | LINC00161 | 118421 | 9 | 1 | 60 | |
| GSE54994 | LINC00161 | 118421 | 1 | 9 | 43 | |
| GSE60625 | LINC00161 | 118421 | 0 | 0 | 11 | |
| GSE74703 | LINC00161 | 118421 | 1 | 6 | 29 | |
| GSE74704 | LINC00161 | 118421 | 2 | 6 | 12 | |
| TCGA | LINC00161 | 118421 | 9 | 37 | 50 |
Total number of gains: 34; Total number of losses: 123; Total Number of normals: 331.
Somatic mutations of LINC00161:
Generating mutation plots.
Highly correlated genes for LINC00161:
Showing top 20/203 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00161 | CLDN9 | 0.778364 | 3 | 0 | 3 |
| LINC00161 | LINC00608 | 0.751195 | 3 | 0 | 3 |
| LINC00161 | MEGF11 | 0.719465 | 3 | 0 | 3 |
| LINC00161 | MYO15A | 0.713087 | 3 | 0 | 3 |
| LINC00161 | IGF2-AS | 0.699818 | 3 | 0 | 3 |
| LINC00161 | KCNK9 | 0.696095 | 3 | 0 | 3 |
| LINC00161 | BARHL1 | 0.694749 | 3 | 0 | 3 |
| LINC00161 | LRRIQ3 | 0.68191 | 3 | 0 | 3 |
| LINC00161 | ASIC4 | 0.680717 | 3 | 0 | 3 |
| LINC00161 | LINC00486 | 0.679087 | 5 | 0 | 4 |
| LINC00161 | SLC22A31 | 0.677481 | 3 | 0 | 3 |
| LINC00161 | FAM216A | 0.676931 | 3 | 0 | 3 |
| LINC00161 | FFAR1 | 0.674603 | 5 | 0 | 5 |
| LINC00161 | CALY | 0.673879 | 3 | 0 | 3 |
| LINC00161 | CAMKV | 0.673191 | 3 | 0 | 3 |
| LINC00161 | CD72 | 0.671294 | 3 | 0 | 3 |
| LINC00161 | MPPED1 | 0.665977 | 4 | 0 | 3 |
| LINC00161 | SERPINA10 | 0.660729 | 4 | 0 | 3 |
| LINC00161 | KCNQ1OT1 | 0.658831 | 3 | 0 | 3 |
| LINC00161 | SLAMF9 | 0.657372 | 5 | 0 | 5 |
For details and further investigation, click here
