LINC01085

 

Full name: long intergenic non-protein coding RNA 1085 Alias Symbol: 
Type: non-coding RNA Cytoband: 4p15.33
Entrez ID: 152742 HGNC ID: HGNC:27198 Ensembl Gene: ENSG00000248698 OMIM ID: 

 

Expression of LINC01085:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LINC01085 152742 240167_at 0.1140 0.5531
GSE26886 LINC01085 152742 240167_at 0.0329 0.7470
GSE45670 LINC01085 152742 240167_at -0.0144 0.8329
GSE53622 LINC01085 152742 24218 0.1203 0.2710
GSE53624 LINC01085 152742 24218 0.6772 0.0000
GSE63941 LINC01085 152742 240167_at 0.0783 0.4221
GSE77861 LINC01085 152742 240167_at -0.0621 0.4778

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by LINC01085 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of LINC01085:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LINC01085 152742 0 18 12
GSE20123 LINC01085 152742 0 18 12
GSE43470 LINC01085 152742 1 15 27
GSE46452 LINC01085 152742 1 36 22
GSE47630 LINC01085 152742 0 20 20
GSE54993 LINC01085 152742 10 0 60
GSE54994 LINC01085 152742 4 12 37
GSE60625 LINC01085 152742 0 0 11
GSE74703 LINC01085 152742 1 13 22
GSE74704 LINC01085 152742 0 11 9

Total number of gains: 17; Total number of losses: 143; Total Number of normals: 232.  

 

Somatic mutations of LINC01085:

 

Generating mutation plots.

 

Highly correlated genes for LINC01085:

 

Showing all 4 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LINC01085KRT850.631214303
LINC01085CD480.583567303
LINC01085SPATS10.562437303
LINC01085FCAR0.548337303

For details and further investigation, click here