LINC01180

 

Full name: long intergenic non-protein coding RNA 1180 Alias Symbol: 
Type: non-coding RNA Cytoband: 17q21.31
Entrez ID: 101927017 HGNC ID: HGNC:49558 Ensembl Gene: ENSG00000266979 OMIM ID: 

 

Expression of LINC01180:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LINC01180 101927017 1561400_at -0.0561 0.8072
GSE26886 LINC01180 101927017 1561400_at 0.1109 0.2435
GSE45670 LINC01180 101927017 1561400_at 0.0730 0.3741
GSE63941 LINC01180 101927017 1561400_at -0.0159 0.9136
GSE77861 LINC01180 101927017 1561400_at -0.0887 0.2806
SRP133303 LINC01180 101927017 RNAseq 0.1704 0.2444
SRP159526 LINC01180 101927017 RNAseq 0.6146 0.3279
SRP193095 LINC01180 101927017 RNAseq 0.1070 0.4835

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Copy number change of LINC01180:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LINC01180 101927017 6 2 22
GSE20123 LINC01180 101927017 6 2 22
GSE43470 LINC01180 101927017 1 2 40
GSE46452 LINC01180 101927017 32 0 27
GSE47630 LINC01180 101927017 9 0 31
GSE54993 LINC01180 101927017 3 4 63
GSE54994 LINC01180 101927017 8 5 40
GSE60625 LINC01180 101927017 4 0 7
GSE74703 LINC01180 101927017 1 1 34
GSE74704 LINC01180 101927017 4 1 15

Total number of gains: 74; Total number of losses: 17; Total Number of normals: 301.  

 

Somatic mutations of LINC01180:

 

Generating mutation plots.

 

Highly correlated genes for LINC01180:

 

Showing all 6 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LINC01180QRICH20.658356303
LINC01180CA10.650787303
LINC01180LINC005720.612559303
LINC01180CAV30.606355303
LINC01180STARD13-AS0.540798303
LINC01180MYOZ30.512418303

For details and further investigation, click here