| Full name: long intergenic non-protein coding RNA 572 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 13q12.3 | ||
| Entrez ID: 100861573 | HGNC ID: HGNC:43722 | Ensembl Gene: ENSG00000224405 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00572:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00572 | 100861573 | 1563296_at | -0.2296 | 0.2385 | |
| GSE26886 | LINC00572 | 100861573 | 1563296_at | -0.0186 | 0.8550 | |
| GSE45670 | LINC00572 | 100861573 | 1563296_at | 0.0524 | 0.5702 | |
| GSE53622 | LINC00572 | 100861573 | 73924 | 0.5659 | 0.0000 | |
| GSE53624 | LINC00572 | 100861573 | 73924 | 0.6321 | 0.0000 | |
| GSE63941 | LINC00572 | 100861573 | 1563296_at | 0.0302 | 0.8524 | |
| GSE77861 | LINC00572 | 100861573 | 1563296_at | -0.1178 | 0.2060 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC00572 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00572:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00572 | 100861573 | 1 | 13 | 16 | |
| GSE20123 | LINC00572 | 100861573 | 1 | 12 | 17 | |
| GSE43470 | LINC00572 | 100861573 | 2 | 12 | 29 | |
| GSE46452 | LINC00572 | 100861573 | 0 | 33 | 26 | |
| GSE47630 | LINC00572 | 100861573 | 2 | 27 | 11 | |
| GSE54993 | LINC00572 | 100861573 | 12 | 2 | 56 | |
| GSE54994 | LINC00572 | 100861573 | 2 | 14 | 37 | |
| GSE60625 | LINC00572 | 100861573 | 0 | 3 | 8 | |
| GSE74703 | LINC00572 | 100861573 | 2 | 9 | 25 | |
| GSE74704 | LINC00572 | 100861573 | 0 | 10 | 10 | |
| TCGA | LINC00572 | 100861573 | 8 | 37 | 51 |
Total number of gains: 30; Total number of losses: 172; Total Number of normals: 286.
Somatic mutations of LINC00572:
Generating mutation plots.
Highly correlated genes for LINC00572:
Showing all 14 correlated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00572 | LINC01180 | 0.612559 | 3 | 0 | 3 |
| LINC00572 | LINC01366 | 0.599648 | 4 | 0 | 3 |
| LINC00572 | CNTFR-AS1 | 0.590523 | 3 | 0 | 3 |
| LINC00572 | TAS2R41 | 0.580944 | 3 | 0 | 3 |
| LINC00572 | CYP2A7 | 0.568348 | 5 | 0 | 3 |
| LINC00572 | ZNF619 | 0.556114 | 4 | 0 | 3 |
| LINC00572 | CAMK2B | 0.545194 | 4 | 0 | 3 |
| LINC00572 | CARS-AS1 | 0.534594 | 4 | 0 | 3 |
| LINC00572 | GPR50 | 0.523413 | 5 | 0 | 3 |
| LINC00572 | LYPD8 | 0.519293 | 4 | 0 | 3 |
| LINC00572 | TMEM105 | 0.517458 | 4 | 0 | 3 |
| LINC00572 | TNFRSF13C | 0.513459 | 5 | 0 | 3 |
| LINC00572 | NR1I3 | 0.51269 | 4 | 0 | 3 |
| LINC00572 | CCR4 | 0.501204 | 4 | 0 | 3 |
For details and further investigation, click here
