NTN5

 

Full name: netrin 5 Alias Symbol: 
Type: protein-coding gene Cytoband: 19q13.33
Entrez ID: 126147 HGNC ID: HGNC:25208 Ensembl Gene: ENSG00000142233 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of NTN5:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 NTN5 126147 1553890_s_at -0.0675 0.8102
GSE26886 NTN5 126147 1553890_s_at 0.2682 0.1612
GSE45670 NTN5 126147 1553890_s_at 0.0583 0.6806
GSE53622 NTN5 126147 52925 -0.0741 0.3013
GSE53624 NTN5 126147 52925 0.0480 0.6044
GSE63941 NTN5 126147 1553890_s_at 0.4385 0.1247
GSE77861 NTN5 126147 1553890_s_at -0.0197 0.8877
SRP159526 NTN5 126147 RNAseq 0.7803 0.1408
SRP219564 NTN5 126147 RNAseq 0.3775 0.4283
TCGA NTN5 126147 RNAseq 0.7616 0.0228

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by NTN5 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of NTN5:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 NTN5 126147 4 4 22
GSE20123 NTN5 126147 4 3 23
GSE43470 NTN5 126147 4 10 29
GSE46452 NTN5 126147 45 1 13
GSE47630 NTN5 126147 9 6 25
GSE54993 NTN5 126147 17 4 49
GSE54994 NTN5 126147 4 14 35
GSE60625 NTN5 126147 9 0 2
GSE74703 NTN5 126147 4 7 25
GSE74704 NTN5 126147 4 1 15
TCGA NTN5 126147 14 18 64

Total number of gains: 118; Total number of losses: 68; Total Number of normals: 302.  

 

Somatic mutations of NTN5:

 

Generating mutation plots.

 

Highly correlated genes for NTN5:

 

Showing all 7 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
NTN5LINC009280.602896303
NTN5MCF2L-AS10.589632303
NTN5TAS2R100.577518303
NTN5ROR1-AS10.573364303
NTN5CPA60.557615503
NTN5LINC011530.547089403
NTN5CBX20.53152303

For details and further investigation, click here