| Full name: MCF2L antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 13q34 | ||
| Entrez ID: 100289410 | HGNC ID: HGNC:39825 | Ensembl Gene: ENSG00000235280 | OMIM ID: |
Expression of MCF2L-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | MCF2L-AS1 | 100289410 | 220354_at | -0.2682 | 0.7124 | |
| GSE20347 | MCF2L-AS1 | 100289410 | 220354_at | 0.3582 | 0.4024 | |
| GSE23400 | MCF2L-AS1 | 100289410 | 220354_at | -0.0287 | 0.4742 | |
| GSE26886 | MCF2L-AS1 | 100289410 | 220354_at | 1.1738 | 0.0079 | |
| GSE29001 | MCF2L-AS1 | 100289410 | 220354_at | -0.1273 | 0.7604 | |
| GSE38129 | MCF2L-AS1 | 100289410 | 220354_at | 0.4211 | 0.1080 | |
| GSE45670 | MCF2L-AS1 | 100289410 | 220354_at | -0.2589 | 0.4062 | |
| GSE53622 | MCF2L-AS1 | 100289410 | 11038 | -0.2702 | 0.2927 | |
| GSE53624 | MCF2L-AS1 | 100289410 | 11038 | -0.7961 | 0.0000 | |
| GSE63941 | MCF2L-AS1 | 100289410 | 220354_at | 1.3201 | 0.2392 | |
| GSE77861 | MCF2L-AS1 | 100289410 | 220354_at | -0.0341 | 0.6928 | |
| SRP133303 | MCF2L-AS1 | 100289410 | RNAseq | -0.4759 | 0.3369 | |
| SRP159526 | MCF2L-AS1 | 100289410 | RNAseq | 0.6776 | 0.0734 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by MCF2L-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of MCF2L-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | MCF2L-AS1 | 100289410 | 7 | 12 | 11 | |
| GSE20123 | MCF2L-AS1 | 100289410 | 7 | 11 | 12 | |
| GSE43470 | MCF2L-AS1 | 100289410 | 4 | 14 | 25 | |
| GSE46452 | MCF2L-AS1 | 100289410 | 3 | 31 | 25 | |
| GSE47630 | MCF2L-AS1 | 100289410 | 3 | 26 | 11 | |
| GSE54993 | MCF2L-AS1 | 100289410 | 11 | 4 | 55 | |
| GSE54994 | MCF2L-AS1 | 100289410 | 9 | 9 | 35 | |
| GSE60625 | MCF2L-AS1 | 100289410 | 0 | 3 | 8 | |
| GSE74703 | MCF2L-AS1 | 100289410 | 3 | 10 | 23 | |
| GSE74704 | MCF2L-AS1 | 100289410 | 4 | 9 | 7 |
Total number of gains: 51; Total number of losses: 129; Total Number of normals: 212.
Somatic mutations of MCF2L-AS1:
Generating mutation plots.
Highly correlated genes for MCF2L-AS1:
Showing top 20/40 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| MCF2L-AS1 | ABCB7 | 0.653768 | 3 | 0 | 3 |
| MCF2L-AS1 | CARS2 | 0.647339 | 4 | 0 | 3 |
| MCF2L-AS1 | RAB40B | 0.633071 | 3 | 0 | 3 |
| MCF2L-AS1 | CDC16 | 0.62757 | 4 | 0 | 3 |
| MCF2L-AS1 | NRN1 | 0.61925 | 4 | 0 | 3 |
| MCF2L-AS1 | ARHGEF7 | 0.619238 | 5 | 0 | 4 |
| MCF2L-AS1 | DCUN1D2 | 0.618336 | 6 | 0 | 4 |
| MCF2L-AS1 | EGF | 0.609199 | 4 | 0 | 4 |
| MCF2L-AS1 | PCID2 | 0.603721 | 4 | 0 | 4 |
| MCF2L-AS1 | OBSL1 | 0.59825 | 3 | 0 | 3 |
| MCF2L-AS1 | IKZF1 | 0.597332 | 3 | 0 | 3 |
| MCF2L-AS1 | PIP5K1B | 0.591538 | 4 | 0 | 4 |
| MCF2L-AS1 | NTN5 | 0.589632 | 3 | 0 | 3 |
| MCF2L-AS1 | STOX1 | 0.588925 | 5 | 0 | 4 |
| MCF2L-AS1 | GRTP1 | 0.587538 | 6 | 0 | 4 |
| MCF2L-AS1 | GDF15 | 0.582855 | 5 | 0 | 3 |
| MCF2L-AS1 | PRKAG2-AS1 | 0.571766 | 7 | 0 | 3 |
| MCF2L-AS1 | INPP4A | 0.570603 | 3 | 0 | 3 |
| MCF2L-AS1 | ZNF510 | 0.56497 | 4 | 0 | 3 |
| MCF2L-AS1 | SPACA1 | 0.555101 | 4 | 0 | 3 |
For details and further investigation, click here
