SVOP

 

Full name: SV2 related protein Alias Symbol: DKFZp761H039
Type: protein-coding gene Cytoband: 12q24.11
Entrez ID: 55530 HGNC ID: HGNC:25417 Ensembl Gene: ENSG00000166111 OMIM ID: 611699

 

Expression of SVOP:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SVOP 55530 1568625_at 0.1059 0.5913
GSE26886 SVOP 55530 1568625_at 0.1635 0.1219
GSE45670 SVOP 55530 1568625_at 0.1341 0.0540
GSE63941 SVOP 55530 1568625_at 0.1945 0.1229
GSE77861 SVOP 55530 1568625_at -0.0014 0.9927
SRP133303 SVOP 55530 RNAseq 0.3277 0.0734
SRP193095 SVOP 55530 RNAseq 0.1091 0.5141
TCGA SVOP 55530 RNAseq -3.1650 0.0011

Upregulated datasets: 0; Downregulated datasets: 1.  

 

Survival by SVOP expression:

 

TCGA

 

Note: Click image to view full size file.  

Copy number change of SVOP:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SVOP 55530 5 3 22
GSE20123 SVOP 55530 5 4 21
GSE43470 SVOP 55530 2 1 40
GSE46452 SVOP 55530 9 1 49
GSE47630 SVOP 55530 9 1 30
GSE54993 SVOP 55530 0 5 65
GSE54994 SVOP 55530 3 4 46
GSE60625 SVOP 55530 0 0 11
GSE74703 SVOP 55530 2 0 34
GSE74704 SVOP 55530 2 2 16
TCGA SVOP 55530 21 10 65

Total number of gains: 58; Total number of losses: 31; Total Number of normals: 399.  

 

Somatic mutations of SVOP:

 

Generating mutation plots.

 

Highly correlated genes for SVOP:

 

Showing all 5 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SVOPLYG20.627108303
SVOPPOU5F1B0.593508303
SVOPKDM6B0.587223303
SVOPTNK20.56761303
SVOPREC80.506927403

For details and further investigation, click here